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MYF6 myogenic factor 6 [ Canis lupus familiaris (dog) ]

Gene ID: 611531, updated on 5-Mar-2024

Summary

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Official Symbol
MYF6provided by VGNC
Official Full Name
myogenic factor 6provided by VGNC
Primary source
VGNC:VGNC:43534
See related
Ensembl:ENSCAFG00845009704
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (23399954..23404522)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (23462866..23467438)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (23277134..23281706)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (22977287..22981857)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (23036794..23041335)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type Q Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC102156585 Neighboring gene myogenic factor 5 Neighboring gene lin-7 homolog A, crumbs cell polarity complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification and analysis of basic helix-loop-helix domains in dog, Canis lupus familiaris. Wang XH, et al. Mol Genet Genomics, 2015 Apr. PMID 25403511

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenic factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    23399954..23404522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688121.1 → XP_038544049.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  2. XM_038688122.1 → XP_038544050.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  3. XM_038688120.1 → XP_038544048.1  myogenic factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KRZ7, A0A8C0QQ32, A0A8I3N246
    Related
    ENSCAFP00845013327.1, ENSCAFT00845017110.1
    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    22977287..22981857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038496837.1 → XP_038352765.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  2. XM_038496838.1 → XP_038352766.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  3. XM_038496836.1 → XP_038352764.1  myogenic factor 6 isoform X1

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    23036794..23041335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038622427.1 → XP_038478355.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  2. XM_038622428.1 → XP_038478356.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  3. XM_038622426.1 → XP_038478354.1  myogenic factor 6 isoform X1

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    23277134..23281706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038558533.1 → XP_038414461.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  2. XM_038558534.1 → XP_038414462.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  3. XM_038558532.1 → XP_038414460.1  myogenic factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KRZ7, A0A8C0QQ32, A0A8I3N246
    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    23462866..23467438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038451900.1 → XP_038307828.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  2. XM_038451901.1 → XP_038307829.1  myogenic factor 6 isoform X2

    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain

  3. XM_038451899.1 → XP_038307827.1  myogenic factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KRZ7, A0A8C0QQ32, A0A8I3N246
    Conserved Domains (2) summary
    cd18934
    Location:93 → 156
    bHLH_TS_MRF4_Myf6; basic helix-loop-helix (bHLH) domain found in muscle-specific regulatory factor 4 (MRF4) and similar proteins
    cl11603
    Location:3 → 98
    Basic; Myogenic Basic domain
Nucleotide Protein
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