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YY1 YY1 transcription factor [ Canis lupus familiaris (dog) ]

Gene ID: 611171, updated on 5-Mar-2024

Summary

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Official Symbol
YY1provided by VGNC
Official Full Name
YY1 transcription factorprovided by VGNC
Primary source
VGNC:VGNC:51693
See related
Ensembl:ENSCAFG00845004246
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (68823410..68856669)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (68058331..68091508)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (68948873..68982099)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (68485332..68518533)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (68551498..68584736)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC111097162 Neighboring gene uncharacterized LOC102156900 Neighboring gene solute carrier family 25 member 29 Neighboring gene microRNA mir-345

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor protein YY1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    68823410..68856669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674627.1 → XP_038530555.1  transcriptional repressor protein YY1

    UniProtKB/TrEMBL
    A0A8C0MED5, A0A8C0Q4Q1, A0A8I3MKF1
    Related
    ENSCAFP00845006029.1, ENSCAFT00845007628.1
    Conserved Domains (2) summary
    COG5048
    Location:264 → 403
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:323 → 343
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    68485332..68518533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038484197.1 → XP_038340125.1  transcriptional repressor protein YY1

    Conserved Domains (2) summary
    COG5048
    Location:264 → 403
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:323 → 343
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    68551498..68584736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609804.1 → XP_038465732.1  transcriptional repressor protein YY1

    Conserved Domains (2) summary
    COG5048
    Location:264 → 403
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:323 → 343
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    68948873..68982099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545711.1 → XP_038401639.1  transcriptional repressor protein YY1

    UniProtKB/TrEMBL
    A0A8C0MED5, A0A8C0Q4Q1, A0A8I3MKF1
    Conserved Domains (2) summary
    COG5048
    Location:264 → 403
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:323 → 343
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    68058331..68091508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_849421.6 → XP_854514.1  transcriptional repressor protein YY1

    See identical proteins and their annotated locations for XP_854514.1

    UniProtKB/TrEMBL
    A0A8C0MED5, A0A8C0Q4Q1, A0A8I3MKF1
    Conserved Domains (2) summary
    COG5048
    Location:264 → 403
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:323 → 343
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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