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E2F5 E2F transcription factor 5 [ Canis lupus familiaris (dog) ]

Gene ID: 611103, updated on 5-Mar-2024

Summary

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Official Symbol
E2F5provided by VGNC
Official Full Name
E2F transcription factor 5provided by VGNC
Primary source
VGNC:VGNC:40167
See related
Ensembl:ENSCAFG00845016764
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 29
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (31876597..31904670)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (32010179..32037439)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (32333466..32361295)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (31931443..31958633)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (31949625..31977358)

Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093189 Neighboring gene transcription elongation factor A protein-like 3 Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene uncharacterized LOC119866735 Neighboring gene adenylyl cyclase-associated protein 1-like Neighboring gene ribosomal biogenesis factor Neighboring gene carbonic anhydrase 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2F5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051833.1 Reference ROS_Cfam_1.0

    Range
    31876597..31904670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038441520.1 → XP_038297448.1  transcription factor E2F5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7G8, A0A8C0MTU0, A0A8I3P2W2
    Related
    ENSCAFP00845023365.1, ENSCAFT00845029747.1
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_038441521.1 → XP_038297449.1  transcription factor E2F5 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L7G8
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049289.1 Alternate UMICH_Zoey_3.1

    Range
    31931443..31958633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038516087.1 → XP_038372015.1  transcription factor E2F5 isoform X1

    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_038516089.1 → XP_038372017.1  transcription factor E2F5 isoform X2

    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

    Range
    31949625..31977358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038643901.1 → XP_038499829.1  transcription factor E2F5 isoform X1

    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_038643902.1 → XP_038499830.1  transcription factor E2F5 isoform X2

    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

    Range
    32333466..32361295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038579660.1 → XP_038435588.1  transcription factor E2F5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7G8, A0A8C0MTU0, A0A8I3P2W2
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_038579661.1 → XP_038435589.1  transcription factor E2F5 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L7G8
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32010179..32037439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038461030.1 → XP_038316958.1  transcription factor E2F5 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7G8, A0A8C0MTU0, A0A8I3P2W2
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_038461031.1 → XP_038316959.1  transcription factor E2F5 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L7G8
    Conserved Domains (2) summary
    cd14660
    Location:125 → 229
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 113
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
Nucleotide Protein
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