SAP18 Sin3A associated protein 18 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: SAP18provided by VGNC
Official Full Name: Sin3A associated protein 18provided by VGNC
Primary source: VGNC:VGNC:45859
See related: Ensembl:ENSCAFG00845021235
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 25

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	25	NC_051829.1 (17144308..17151179, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	25	NC_006607.4 (17104759..17111055, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	25	NC_049246.1 (17086581..17092879, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	25	NC_049285.1 (17019023..17025322, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	25	NC_049766.1 (17030495..17036791, complement)

Chromosome 25 - NC_051829.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables transcription corepressor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables transcription factor binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: histone deacetylase complex subunit SAP18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001252161.1 → NP_001239090.1 histone deacetylase complex subunit SAP18

See identical proteins and their annotated locations for NP_001239090.1

Status: VALIDATED

Source sequence(s)

CO673277, CX993913, DT542607

UniProtKB/TrEMBL

A0A8C0JN23, A0A8C0LN28, A0A8C0RSG0

Related

ENSCAFP00845029366.1, ENSCAFT00845037481.1

Conserved Domains (1) summary

pfam06487
Location:38 → 156

SAP18; Sin3 associated polypeptide p18 (SAP18)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051829.1 Reference ROS_Cfam_1.0

Range

17144308..17151179 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038434581.1 → XP_038290509.1 histone deacetylase complex subunit SAP18 isoform X1

Conserved Domains (1) summary

pfam06487
Location:134 → 252

SAP18; Sin3 associated polypeptide p18 (SAP18)