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POLR3H RNA polymerase III subunit H [ Canis lupus familiaris (dog) ]

Gene ID: 607850, updated on 5-Mar-2024

Summary

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Official Symbol
POLR3Hprovided by VGNC
Official Full Name
RNA polymerase III subunit Hprovided by VGNC
Primary source
VGNC:VGNC:44806
See related
Ensembl:ENSCAFG00845016808
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (24473548..24487267)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (23661399..23675108)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (24685664..24699377)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (24190351..24204061)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (24511563..24525229)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene phosphomannomutase 1 Neighboring gene cold shock domain containing C2 Neighboring gene aconitase 2 Neighboring gene uncharacterized LOC111097641 Neighboring gene uncharacterized LOC119873622

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC8
Names
polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
XP_005625884.1
XP_038344425.1
XP_038344426.1
XP_038406352.1
XP_038406353.1
XP_038470317.1
XP_038470318.1
XP_038535660.1
XP_038535661.1
XP_849136.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    24473548..24487267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038679732.1 → XP_038535660.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNX5, A0A8C0PIG4, A0A8C0SX43, A0A8I3NXV7, A0A8I3P155
    Related
    ENSCAFP00845023399.1, ENSCAFT00845029795.1
    Conserved Domains (2) summary
    cd04330
    Location:2 → 81
    RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
    pfam08292
    Location:83 → 201
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

  2. XM_038679733.1 → XP_038535661.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SY15, A0A8P0S712
    Conserved Domains (1) summary
    pfam08292
    Location:63 → 181
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    24190351..24204061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488497.1 → XP_038344425.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

    Conserved Domains (2) summary
    cd04330
    Location:2 → 81
    RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
    pfam08292
    Location:83 → 201
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

  2. XM_038488498.1 → XP_038344426.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

    Conserved Domains (1) summary
    pfam08292
    Location:63 → 181
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    24511563..24525229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038614389.1 → XP_038470317.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

    Conserved Domains (2) summary
    cd04330
    Location:2 → 81
    RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
    pfam08292
    Location:83 → 201
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

  2. XM_038614390.1 → XP_038470318.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

    Conserved Domains (1) summary
    pfam08292
    Location:63 → 181
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    24685664..24699377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038550424.1 → XP_038406352.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNX5, A0A8C0PIG4, A0A8C0SX43, A0A8I3NXV7, A0A8I3P155
    Conserved Domains (2) summary
    cd04330
    Location:2 → 81
    RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
    pfam08292
    Location:83 → 201
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

  2. XM_038550425.1 → XP_038406353.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SY15, A0A8P0S712
    Conserved Domains (1) summary
    pfam08292
    Location:63 → 181
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    23661399..23675108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_844043.5 → XP_849136.1  DNA-directed RNA polymerase III subunit RPC8 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JNX5, A0A8C0PIG4, A0A8C0SX43, A0A8I3NXV7, A0A8I3P155
    Conserved Domains (2) summary
    cd04330
    Location:2 → 81
    RNAP_III_Rpc25_N; Rpc25, N-terminal ribonucleoprotein (RNP) domain. Rpc25 is a subunit of eukaryotic RNA polymerase (RNAP) III and is homologous to Rpa43 of eukaryotic RNAP I, Rpb7 of eukaryotic RNAP II, and RpoE of archaeal RNAP. Rpc25 has two domains, an N-terminal RNP ...
    pfam08292
    Location:83 → 201
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25

  2. XM_005625827.4 → XP_005625884.1  DNA-directed RNA polymerase III subunit RPC8 isoform X2

    UniProtKB/TrEMBL
    A0A8C0SY15, A0A8P0S712
    Conserved Domains (1) summary
    pfam08292
    Location:63 → 181
    RNA_pol_Rbc25; RNA polymerase III subunit Rpc25
Nucleotide Protein
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