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SAP30 Sin3A associated protein 30 [ Canis lupus familiaris (dog) ]

Gene ID: 607359, updated on 17-Aug-2024

Summary

Official Symbol
SAP30provided by VGNC
Official Full Name
Sin3A associated protein 30provided by VGNC
Primary source
VGNC:VGNC:45860
See related
Ensembl:ENSCAFG00845017098
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See SAP30 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (24135020..24140861)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (24622551..24628366)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (24121526..24127344)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (24081285..24087117)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (23971624..23977439)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene basic proline-rich protein-like Neighboring gene high mobility group box 2 Neighboring gene uncharacterized LOC119865931 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene 60S ribosomal protein L38-like

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of histone deacetylase complex PubMed 

General protein information

Preferred Names
histone deacetylase complex subunit SAP30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    24135020..24140861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038435202.1XP_038291130.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
  2. XM_038435201.1XP_038291129.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Related
    ENSCAFP00845023729.1, ENSCAFT00845030259.1
    Conserved Domains (2) summary
    pfam13866
    Location:65133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    24081285..24087117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038510146.1XP_038366074.1  histone deacetylase complex subunit SAP30 isoform X2

  2. XM_038510145.1XP_038366073.1  histone deacetylase complex subunit SAP30 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    23971624..23977439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637911.1XP_038493839.1  histone deacetylase complex subunit SAP30 isoform X2

    Conserved Domains (2) summary
    pfam13866
    Location:65125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
  2. XM_038637910.1XP_038493838.1  histone deacetylase complex subunit SAP30 isoform X1

    Conserved Domains (2) summary
    pfam13866
    Location:65133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    24121526..24127344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573602.1XP_038429530.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
  2. XM_038573601.1XP_038429529.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Conserved Domains (2) summary
    pfam13866
    Location:65133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24622551..24628366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022409695.2XP_022265403.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
  2. XM_843990.6XP_849083.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Conserved Domains (2) summary
    pfam13866
    Location:65133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
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