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SAP30 Sin3A associated protein 30 [ Canis lupus familiaris (dog) ]

Gene ID: 607359, updated on 5-Mar-2024

Summary

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Official Symbol
SAP30provided by VGNC
Official Full Name
Sin3A associated protein 30provided by VGNC
Primary source
VGNC:VGNC:45860
See related
Ensembl:ENSCAFG00845017098
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (24135020..24140861)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (24622551..24628366)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (24121526..24127344)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (24081285..24087117)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (23971624..23977439)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene basic proline-rich protein-like Neighboring gene high mobility group box 2 Neighboring gene uncharacterized LOC119865931 Neighboring gene stimulator of chondrogenesis 1 Neighboring gene 60S ribosomal protein L38-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase complex subunit SAP30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    24135020..24140861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038435202.1 → XP_038291130.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145 → 197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

  2. XM_038435201.1 → XP_038291129.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Related
    ENSCAFP00845023729.1, ENSCAFT00845030259.1
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153 → 205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    24081285..24087117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038510146.1 → XP_038366074.1  histone deacetylase complex subunit SAP30 isoform X2

  2. XM_038510145.1 → XP_038366073.1  histone deacetylase complex subunit SAP30 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    23971624..23977439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637911.1 → XP_038493839.1  histone deacetylase complex subunit SAP30 isoform X2

    Conserved Domains (2) summary
    pfam13866
    Location:65 → 125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145 → 197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

  2. XM_038637910.1 → XP_038493838.1  histone deacetylase complex subunit SAP30 isoform X1

    Conserved Domains (2) summary
    pfam13866
    Location:65 → 133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153 → 205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    24121526..24127344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573602.1 → XP_038429530.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145 → 197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

  2. XM_038573601.1 → XP_038429529.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153 → 205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24622551..24628366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022409695.2 → XP_022265403.1  histone deacetylase complex subunit SAP30 isoform X2

    UniProtKB/TrEMBL
    A0A8C0TFS6
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 125
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:145 → 197
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

  2. XM_843990.6 → XP_849083.1  histone deacetylase complex subunit SAP30 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NXI2, A0A8C0QZJ5, A0A8C0TFS6, A0A8I3P1N2
    Conserved Domains (2) summary
    pfam13866
    Location:65 → 133
    zf-SAP30; SAP30 zinc-finger
    pfam13867
    Location:153 → 205
    SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30
Nucleotide Protein
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