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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051829.1 Reference ROS_Cfam_1.0
- Range
-
51006207..51016927
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038435987.1 → XP_038291915.1 calpain-10 isoform X1
- UniProtKB/TrEMBL
- A0A8C0LG29, A0A8C0RJ95, A0A8C0TIB0, A0A8I3Q527
- Related
- ENSCAFP00845042874.1, ENSCAFT00845054540.1
- Conserved Domains (2) summary
-
- cd00044
Location:5 → 314
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:332 → 491
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038435990.1 → XP_038291918.1 calpain-10 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RJ95, A0A8I3Q527
- Conserved Domains (3) summary
-
- cd00044
Location:5 → 276
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:395 → 534
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00165
Location:305 → 377
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038435988.1 → XP_038291916.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
-
XM_038435989.1 → XP_038291917.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Alternate UMICH_Zoey_3.1
Genomic
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NC_049285.1 Alternate UMICH_Zoey_3.1
- Range
-
50848152..50858875
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038510910.1 → XP_038366838.1 calpain-10 isoform X1
- Conserved Domains (2) summary
-
- cd00044
Location:5 → 314
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:332 → 491
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038510913.1 → XP_038366841.1 calpain-10 isoform X3
- Conserved Domains (3) summary
-
- cd00044
Location:5 → 276
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:395 → 534
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00165
Location:305 → 377
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038510911.1 → XP_038366839.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
-
XM_038510912.1 → XP_038366840.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049766.1 Alternate UNSW_CanFamBas_1.0
- Range
-
50593900..50604615
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038638636.1 → XP_038494564.1 calpain-10 isoform X1
- Conserved Domains (2) summary
-
- cd00044
Location:5 → 314
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:332 → 491
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038638639.1 → XP_038494567.1 calpain-10 isoform X3
- Conserved Domains (3) summary
-
- cd00044
Location:5 → 276
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:395 → 534
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00165
Location:305 → 377
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038638637.1 → XP_038494565.1 calpain-10 isoform X2
-
XM_038638638.1 → XP_038494566.1 calpain-10 isoform X2
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049246.1 Alternate UU_Cfam_GSD_1.0
- Range
-
50870741..50881464
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038574409.1 → XP_038430337.1 calpain-10 isoform X1
- UniProtKB/TrEMBL
- A0A8C0LG29, A0A8C0RJ95, A0A8C0TIB0, A0A8I3Q527
- Conserved Domains (2) summary
-
- cd00044
Location:5 → 314
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:332 → 491
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038574413.1 → XP_038430341.1 calpain-10 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RJ95, A0A8I3Q527
- Conserved Domains (3) summary
-
- cd00044
Location:5 → 276
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:395 → 534
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00165
Location:305 → 377
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_038574410.1 → XP_038430338.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
-
XM_038574411.1 → XP_038430339.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
51024232..51034956
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_843215.6 → XP_848308.2 calpain-10 isoform X1
- UniProtKB/TrEMBL
- A0A8C0LG29, A0A8C0RJ95, A0A8C0TIB0, A0A8I3Q527
- Conserved Domains (2) summary
-
- cd00044
Location:5 → 314
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:332 → 491
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_022409755.2 → XP_022265463.2 calpain-10 isoform X3
- UniProtKB/TrEMBL
- A0A8C0RJ95, A0A8I3Q527
- Conserved Domains (3) summary
-
- cd00044
Location:5 → 276
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd00214
Location:395 → 534
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00165
Location:305 → 377
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
-
XM_005635934.4 → XP_005635991.2 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
-
XM_038458647.1 → XP_038314575.1 calpain-10 isoform X2
- Conserved Domains (2) summary
-
- cd00214
Location:252 → 411
- Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
- cl00051
Location:73 → 234
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.