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Txn2 thioredoxin 2 [ Mus musculus (house mouse) ]

Gene ID: 56551, updated on 21-Apr-2024

Summary

Official Symbol
Txn2provided by MGI
Official Full Name
thioredoxin 2provided by MGI
Primary source
MGI:MGI:1929468
See related
Ensembl:ENSMUSG00000005354 AllianceGenome:MGI:1929468
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Trx2; 2510006J11Rik
Summary
Predicted to contribute to peptide-methionine (R)-S-oxide reductase activity; peptide-methionine (S)-S-oxide reductase activity; and protein-disulfide reductase activity. Predicted to be involved in cell redox homeostasis. Located in mitochondrion. Is expressed in future spinal cord; spinal cord; and spinal cord white matter. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 29. Orthologous to human TXN2 (thioredoxin 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 463.2), duodenum adult (RPKM 177.0) and 28 other tissues See more
Orthologs
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Genomic context

Location:
15 E1; 15 36.92 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (77799251..77813194, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (77915051..77928994, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy polypeptide 9, non-muscle Neighboring gene STARR-positive B cell enhancer ABC_E140 Neighboring gene STARR-positive B cell enhancer ABC_E5493 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:77680033-77680254 Neighboring gene STARR-seq mESC enhancer starr_39123 Neighboring gene predicted gene, 22107 Neighboring gene predicted gene, 53901 Neighboring gene STARR-seq mESC enhancer starr_39132 Neighboring gene STARR-positive B cell enhancer ABC_E479 Neighboring gene FAD-dependent oxidoreductase domain containing 2 Neighboring gene STARR-positive B cell enhancer ABC_E3146 Neighboring gene eukaryotic translation initiation factor 3, subunit D

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in cell redox homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
thioredoxin, mitochondrial
Names
MTRX
mt-Trx
thioredoxin nuclear gene encoding mitochondrial protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019913.5NP_064297.1  thioredoxin, mitochondrial precursor

    See identical proteins and their annotated locations for NP_064297.1

    Status: PROVISIONAL

    Source sequence(s)
    AL583886
    Consensus CDS
    CCDS27606.1
    UniProtKB/Swiss-Prot
    A2A440, P97493, Q545D5
    Related
    ENSMUSP00000005487.6, ENSMUST00000005487.12
    Conserved Domains (1) summary
    cd02947
    Location:72162
    TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    77799251..77813194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)