phkg1a phosphorylase kinase, gamma 1a (muscle) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: phkg1aprovided by ZNC
Official Full Name: phosphorylase kinase, gamma 1a (muscle)provided by ZNC
Primary source: ZFIN:ZDB-GENE-061103-385
See related: Ensembl:ENSDARG00000030604 AllianceGenome:ZFIN:ZDB-GENE-061103-385
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:153009
Summary: Predicted to enable ATP binding activity; calmodulin binding activity; and phosphorylase kinase activity. Acts upstream of or within angiogenesis. Predicted to be part of phosphorylase kinase complex. Orthologous to human PHKG1 (phosphorylase kinase catalytic subunit gamma 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 15

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (5722530..5742559, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (5734679..5754687, complement)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables calmodulin binding	IEA Inferred from Electronic Annotation more info
enables kinase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info
enables phosphorylase kinase activity	IEA Inferred from Electronic Annotation more info
enables protein kinase activity	IEA Inferred from Electronic Annotation more info
enables protein serine/threonine kinase activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within angiogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within glycogen biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within glycogen metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of phosphorylase kinase complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: phosphorylase kinase gamma subunit 1; phosphorylase kinase, gamma 1a (muscle)

NP_001071080.1

EC 2.7.11.19

XP_021337117.1

EC 2.7.11.19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001077612.1 → NP_001071080.1 phosphorylase kinase, gamma 1a (muscle)

See identical proteins and their annotated locations for NP_001071080.1

Status: PROVISIONAL

Source sequence(s)

BC125847

UniProtKB/TrEMBL

A0JME5, B2GPU8, F6NQ90

Related

ENSDARP00000045984.5, ENSDART00000045985.7

Conserved Domains (2) summary

smart00220
Location:20 → 288

S_TKc; Serine/Threonine protein kinases, catalytic domain

cd14182
Location:16 → 291

STKc_PhKG1; Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 1 subunit

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007126.7 Reference GRCz11 Primary Assembly

Range

5722530..5742559 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021481442.1 → XP_021337117.1 phosphorylase kinase gamma subunit 1 isoform X1

UniProtKB/TrEMBL

A0A8M9Q0G9

Conserved Domains (1) summary

cl21453
Location:16 → 216

PKc_like; Protein Kinases, catalytic domain