cyp3a65 cytochrome P450, family 3, subfamily A, polypeptide 65 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cyp3a65provided by ZNC
Official Full Name: cytochrome P450, family 3, subfamily A, polypeptide 65provided by ZNC
Primary source: ZFIN:ZDB-GENE-050604-1
See related: Ensembl:ENSDARG00000103295 AllianceGenome:ZFIN:ZDB-GENE-050604-1
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:123110
Summary: Predicted to enable steroid hydroxylase activity. Acts upstream of or within response to xenobiotic stimulus. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including digestive system; eye; gill; heart; and ovary. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: partial on reference assembly
Orthologs: all
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Genomic context

Location:: chromosome: 1

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (59338174..59348105, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (58631729..58641660, complement)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

These results provide evidence that zebrafish Pxr may play a role in MDR/MXR through transcriptional regulation of abcb4 and cyp3a65 gene expression.
Title: Regulation of hepatic abcb4 and cyp3a65 gene expression and multidrug/multixenobiotic resistance (MDR/MXR) functional activity in the model teleost, Danio rerio (zebrafish).
CYP3A65 and PXR may be involved in the metabolization and detoxification of microcystins in zebrafish, which may be regulated by dre-miR-27b.
Title: Transcription alterations of microRNAs, cytochrome P4501A1 and 3A65, and AhR and PXR in the liver of zebrafish exposed to crude microcystins.
AHR/AHR2-mediated transcription is likely a common regulatory mechanism for teleost CYP3A65 genes in zebrafish.
Title: Regulation of zebrafish CYP3A65 transcription by AHR2.
CYP3A65 expression in zebrafish was modulated by tetrachlorodibenzodioxin. CYPA65 expression in zebrafish was enhanced in larval intestine by rifampicin and dexamethasone.
Title: Constitutive and xenobiotics-induced expression of a novel CYP3A gene from zebrafish larva.

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General gene information

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Markers

fd61g06.y1 (e-PCR)
- UniSTS:195845

fb59e11.y1 (e-PCR)
- UniSTS:190842

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables heme binding	IEA Inferred from Electronic Annotation more info
enables iron ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables monooxygenase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEA Inferred from Electronic Annotation more info
enables steroid hydroxylase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within response to xenobiotic stimulus	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cytochrome P450, family 3, subfamily A, polypeptide 65

Names: cytochrome P450 3A65

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.