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mrpl41 mitochondrial ribosomal protein L41 [ Danio rerio (zebrafish) ]

Gene ID: 553805, updated on 27-Mar-2024

Summary

Official Symbol
mrpl41provided by ZNC
Official Full Name
mitochondrial ribosomal protein L41provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-200
See related
Ensembl:ENSDARG00000002264 AllianceGenome:ZFIN:ZDB-GENE-050522-200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:112362
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within apoptotic process. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL41 (mitochondrial ribosomal protein L41). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See mrpl41 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (25072949..25075183)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (24569149..24571383)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 5 Neighboring gene patatin-like phospholipase domain containing 7b Neighboring gene diphthamide biosynthesis 7 Neighboring gene PAXX non-homologous end joining factor

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Clone Names

  • MGC112362

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
part_of mitochondrial large ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
large ribosomal subunit protein mL41
Names
39S ribosomal protein L41, mitochondrial
L41mt
MRP-L41

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020767.1NP_001018603.1  large ribosomal subunit protein mL41 precursor

    See identical proteins and their annotated locations for NP_001018603.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095781
    UniProtKB/Swiss-Prot
    Q502B0
    UniProtKB/TrEMBL
    B2GSF4
    Related
    ENSDARP00000013437.7, ENSDART00000012268.8
    Conserved Domains (1) summary
    pfam09809
    Location:13125
    MRP-L27; Mitochondrial ribosomal protein L27

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    25072949..25075183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)