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PPP1CA protein phosphatase 1 catalytic subunit alpha [ Bos taurus (cattle) ]

Gene ID: 516175, updated on 13-Apr-2024

Summary

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Official Symbol
PPP1CAprovided by VGNC
Official Full Name
protein phosphatase 1 catalytic subunit alphaprovided by VGNC
Primary source
VGNC:VGNC:106874
See related
BGD:BT10197; Ensembl:ENSBTAG00000012146
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 29
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (45292436..45295867, complement)

Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112444905 Neighboring gene DNA polymerase delta 4, accessory subunit Neighboring gene cardiotrophin like cytokine factor 1 Neighboring gene RAD9 checkpoint clamp component A Neighboring gene TBC1 domain family member 10C Neighboring gene uncharacterized LOC112444920 Neighboring gene carnosine synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein Phosphatase 1 binds strongly to the retinoblastoma protein but not to p107 or p130 in vitro and in vivo. Dunaief JL, et al. Curr Eye Res, 2002 May. PMID 12434308
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC127348

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Names
PP-1A
NP_001030393.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035316.2 → NP_001030393.1  serine/threonine-protein phosphatase PP1-alpha catalytic subunit

    See identical proteins and their annotated locations for NP_001030393.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102424
    UniProtKB/Swiss-Prot
    Q3T0E7
    UniProtKB/TrEMBL
    A0A3Q1N170
    Related
    ENSBTAP00000016111.6, ENSBTAT00000016111.7
    Conserved Domains (1) summary
    cd07414
    Location:8 → 298
    MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    45292436..45295867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3T0E7.1 GenPept UniProtKB/Swiss-Prot:Q3T0E7

Gene LinkOut

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