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PLA2G4B phospholipase A2, group IVB (cytosolic) [ Bos taurus (cattle) ]

Gene ID: 505485, updated on 5-Mar-2024

Summary

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Gene symbol
PLA2G4B
Gene description
phospholipase A2, group IVB (cytosolic)
See related
Ensembl:ENSBTAG00000006784
Gene type
protein coding
RefSeq status
INFERRED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (37228325..37239055)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene MAX dimerization protein MGA Neighboring gene microRNA mir-2285cr-1 Neighboring gene mitogen-activated protein kinase binding protein 1 Neighboring gene jumonji domain containing 7 Neighboring gene spectrin beta, non-erythrocytic 5 Neighboring gene EH domain containing 4 Neighboring gene uncharacterized LOC112448545 Neighboring gene phospholipase A2 group IVE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 beta
NP_001108129.1
XP_010807462.1
XP_010807463.1
XP_010807464.1
XP_024853106.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114657.1 → NP_001108129.1  cytosolic phospholipase A2 beta

    See identical proteins and their annotated locations for NP_001108129.1

    Status: INFERRED

    Source sequence(s)
    NKLS02000010
    UniProtKB/TrEMBL
    A0A3Q1LR65, E1BC49
    Related
    ENSBTAP00000053778.2, ENSBTAT00000061035.4
    Conserved Domains (2) summary
    cd04036
    Location:11 → 130
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:243 → 772
    Patatin_and_cPLA2; Patatins and Phospholipases

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    37228325..37239055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024997338.2 → XP_024853106.1  cytosolic phospholipase A2 beta isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LR65
    Conserved Domains (2) summary
    cd04036
    Location:56 → 175
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:288 → 817
    Patatin_and_cPLA2; Patatins and Phospholipases

  2. XM_010809160.4 → XP_010807462.1  cytosolic phospholipase A2 beta isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LR65
    Conserved Domains (2) summary
    cd04036
    Location:56 → 175
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:288 → 817
    Patatin_and_cPLA2; Patatins and Phospholipases

  3. XM_010809162.4 → XP_010807464.1  cytosolic phospholipase A2 beta isoform X3

    UniProtKB/TrEMBL
    A0A3Q1LR65
    Conserved Domains (2) summary
    cd04036
    Location:56 → 175
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:288 → 757
    Patatin_and_cPLA2; Patatins and Phospholipases

  4. XM_010809161.4 → XP_010807463.1  cytosolic phospholipase A2 beta isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LR65
    Conserved Domains (2) summary
    cd04036
    Location:48 → 167
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    cl11396
    Location:280 → 809
    Patatin_and_cPLA2; Patatins and Phospholipases

RNA

  1. XR_809227.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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