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PLA2G2D4 calcium-dependent phospholipase A2 PLA2G2D4 [ Bos taurus (cattle) ]

Gene ID: 503625, updated on 3-Apr-2024

Summary

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Gene symbol
PLA2G2D4
Gene description
calcium-dependent phospholipase A2 PLA2G2D4
See related
BGD:BT10414; Ensembl:ENSBTAG00000046977
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
PLA2G2D5
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (132534643..132542582)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene UBX domain protein 10 Neighboring gene phospholipase A2 group IIC Neighboring gene phospholipase A2 group IIF Neighboring gene group IID secretory phospholipase A2-like Neighboring gene calcium-dependent phospholipase A2 PLA2G2D1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Accelerated expansion of group IID-like phospholipase A2 genes in Bos taurus. Golik M, et al. Genomics, 2006 Apr. PMID 16469480
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonic acid secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium-dependent phospholipase A2 PLA2G2D4
Names
calcium-dependent phospholipase A2 PLA2G2D5
putative calcium-dependent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012687.4 → NP_001012705.3  calcium-dependent phospholipase A2 PLA2G2D4 precursor

    Status: VALIDATED

    Source sequence(s)
    NKLS02000002
    UniProtKB/TrEMBL
    Q3T154
    Related
    ENSBTAP00000027317.4, ENSBTAT00000027317.5

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    132534643..132542582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_009496606.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials