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ELK1 ETS transcription factor ELK1 [ Canis lupus familiaris (dog) ]

Gene ID: 491860, updated on 5-Mar-2024

Summary

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Official Symbol
ELK1provided by VGNC
Official Full Name
ETS transcription factor ELK1provided by VGNC
Primary source
VGNC:VGNC:40303
See related
Ensembl:ENSCAFG00845030612
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (41390004..41404542, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (15630809..15645355, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (41458515..41473055, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (41377550..41392091, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (41365833..41380367, complement)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene synapsin I Neighboring gene TIMP metallopeptidase inhibitor 1 Neighboring gene complement factor properdin Neighboring gene ubiquitously expressed prefoldin like chaperone Neighboring gene CXXC-type zinc finger protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS domain-containing protein Elk-1
Names
ELK1, ETS transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    41390004..41404542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038449908.1 → XP_038305836.1  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Related
    ENSCAFP00845042669.1, ENSCAFT00845054308.1
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038449909.1 → XP_038305837.1  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    41377550..41392091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038523348.1 → XP_038379276.1  ETS domain-containing protein Elk-1

  2. XM_038523349.1 → XP_038379277.1  ETS domain-containing protein Elk-1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    41365833..41380367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038651830.1 → XP_038507758.1  ETS domain-containing protein Elk-1

    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038651831.1 → XP_038507759.1  ETS domain-containing protein Elk-1

    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    41458515..41473055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038587316.1 → XP_038443244.1  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038587317.1 → XP_038443245.1  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15630809..15645355 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_548979.5 → XP_548979.5  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional

  2. XM_014111821.2 → XP_013967296.2  ETS domain-containing protein Elk-1

    UniProtKB/TrEMBL
    A0A8C0L6H0, A0A8C0N4R2, A0A8C0T3T2, A0A8I3Q408
    Conserved Domains (2) summary
    smart00413
    Location:4 → 89
    ETS; erythroblast transformation specific domain
    PHA03247
    Location:92 → 435
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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