The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ROS_Cfam_1.0

Genomic

1. NC_051813.1 Reference ROS_Cfam_1.0

   Range

   38685116..38719456

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038677300.1 → XP_038533228.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

2. XM_038677299.1 → XP_038533227.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

3. XM_038677297.1 → XP_038533225.1  matrix metalloproteinase-28 isoform X1

   UniProtKB/TrEMBL

   A0A8C0JUA4, A0A8C0QB99, A0A8I3NDY2

   Related

   ENSCAFP00845012900.1, ENSCAFT00845016584.1

   Conserved Domains (3) summary

   cd00094
   Location:321 → 510

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:129 → 284

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

4. XM_038677298.1 → XP_038533226.1  matrix metalloproteinase-28 isoform X2

   Conserved Domains (3) summary

   cd00094
   Location:239 → 428

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

   cl00064
   Location:129 → 202

   ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

5. XM_038677301.1 → XP_038533229.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

Alternate UMICH_Zoey_3.1

Genomic

1. NC_049269.1 Alternate UMICH_Zoey_3.1

   Range

   37467864..37502250

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038486263.1 → XP_038342191.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

2. XM_038486262.1 → XP_038342190.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

3. XM_038486260.1 → XP_038342188.1  matrix metalloproteinase-28 isoform X1

   Conserved Domains (3) summary

   cd00094
   Location:321 → 510

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:129 → 284

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

4. XM_038486261.1 → XP_038342189.1  matrix metalloproteinase-28 isoform X2

   Conserved Domains (3) summary

   cd00094
   Location:239 → 428

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

   cl00064
   Location:129 → 202

   ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

5. XM_038486264.1 → XP_038342192.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

Alternate UNSW_CanFamBas_1.0

Genomic

1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

   Range

   37753363..37787721

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038612052.1 → XP_038467980.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

2. XM_038612051.1 → XP_038467979.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

3. XM_038612049.1 → XP_038467977.1  matrix metalloproteinase-28 isoform X1

   Conserved Domains (3) summary

   cd00094
   Location:321 → 510

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:129 → 284

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

4. XM_038612050.1 → XP_038467978.1  matrix metalloproteinase-28 isoform X2

   Conserved Domains (3) summary

   cd00094
   Location:239 → 428

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

   cl00064
   Location:129 → 202

   ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

5. XM_038612053.1 → XP_038467981.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

Alternate UU_Cfam_GSD_1.0

Genomic

1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

   Range

   37840856..37875211

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038548082.1 → XP_038404010.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

2. XM_038548081.1 → XP_038404009.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

3. XM_038548079.1 → XP_038404007.1  matrix metalloproteinase-28 isoform X1

   UniProtKB/TrEMBL

   A0A8C0JUA4, A0A8C0QB99, A0A8I3NDY2

   Conserved Domains (3) summary

   cd00094
   Location:321 → 510

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:129 → 284

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

4. XM_038548080.1 → XP_038404008.1  matrix metalloproteinase-28 isoform X2

   Conserved Domains (3) summary

   cd00094
   Location:239 → 428

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

   cl00064
   Location:129 → 202

   ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

5. XM_038548083.1 → XP_038404011.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

   Range

   37097600..37131941

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_022423300.2 → XP_022279008.2  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

2. XM_022423299.2 → XP_022279007.2  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

3. XM_548256.7 → XP_548256.3  matrix metalloproteinase-28 isoform X1

   UniProtKB/TrEMBL

   A0A8C0JUA4, A0A8C0QB99, A0A8I3NDY2

   Conserved Domains (3) summary

   cd00094
   Location:321 → 510

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:129 → 284

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

4. XM_038609254.1 → XP_038465182.1  matrix metalloproteinase-28 isoform X2

   Conserved Domains (3) summary

   cd00094
   Location:239 → 428

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   pfam01471
   Location:31 → 86

   PG_binding_1; Putative peptidoglycan binding domain

   cl00064
   Location:129 → 202

   ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...

5. XM_038609272.1 → XP_038465200.1  matrix metalloproteinase-28 isoform X3

   Conserved Domains (2) summary

   cd00094
   Location:236 → 425

   HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...

   cd04278
   Location:44 → 199

   ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...