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NR5A2 nuclear receptor subfamily 5 group A member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 490252, updated on 5-Mar-2024

Summary

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Official Symbol
NR5A2provided by VGNC
Official Full Name
nuclear receptor subfamily 5 group A member 2provided by VGNC
Primary source
VGNC:VGNC:43956
See related
Ensembl:ENSCAFG00845022651
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (2572723..2710945, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (2609186..2746673, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (2688192..2825725, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (2555273..2692729, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (2656611..2794291, complement)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096593 Neighboring gene uncharacterized LOC102152591 Neighboring gene uncharacterized LOC111096594 Neighboring gene uncharacterized LOC111096595 Neighboring gene uncharacterized LOC119872481 Neighboring gene uncharacterized LOC111096855 Neighboring gene uncharacterized LOC111096856

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor subfamily 5 group A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    2572723..2710945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670784.1 → XP_038526712.1  nuclear receptor subfamily 5 group A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KXZ4, A0A8C0PAW5, A0A8C0PF79, A0A8I3PKU6
    Related
    ENSCAFP00845031324.1, ENSCAFT00845040001.1
    Conserved Domains (2) summary
    cd07069
    Location:255 → 495
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:40 → 132
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  2. XM_038670783.1 → XP_038526711.1  nuclear receptor subfamily 5 group A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PF79, A0A8I3S5W8
    Related
    ENSCAFP00845031393.1, ENSCAFT00845040088.1
    Conserved Domains (2) summary
    cd07069
    Location:261 → 501
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:46 → 138
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  3. XM_038670786.1 → XP_038526714.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PC16, A0A8I3PQ40
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  4. XM_038670785.1 → XP_038526713.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PC16, A0A8I3PQ40
    Related
    ENSCAFP00845031443.1, ENSCAFT00845040148.1
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

RNA

  1. XR_005429525.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    2555273..2692729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480628.1 → XP_038336556.1  nuclear receptor subfamily 5 group A member 2 isoform X2

  2. XM_038480627.1 → XP_038336555.1  nuclear receptor subfamily 5 group A member 2 isoform X1

    Conserved Domains (2) summary
    cd07069
    Location:261 → 501
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:46 → 138
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  3. XM_038480630.1 → XP_038336558.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  4. XM_038480629.1 → XP_038336557.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

RNA

  1. XR_005327953.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    2656611..2794291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038606084.1 → XP_038462012.1  nuclear receptor subfamily 5 group A member 2 isoform X2

    Conserved Domains (2) summary
    cd07069
    Location:255 → 495
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:40 → 132
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  2. XM_038606083.1 → XP_038462011.1  nuclear receptor subfamily 5 group A member 2 isoform X1

    Conserved Domains (2) summary
    cd07069
    Location:261 → 501
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:46 → 138
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  3. XM_038606086.1 → XP_038462014.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  4. XM_038606085.1 → XP_038462013.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

RNA

  1. XR_005396320.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    2688192..2825725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541949.1 → XP_038397877.1  nuclear receptor subfamily 5 group A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S725, A0A8C0S7V6, A0A8P0PBZ0

  2. XM_038541948.1 → XP_038397876.1  nuclear receptor subfamily 5 group A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0S725, A0A8P0PS74
    Conserved Domains (2) summary
    cd07069
    Location:261 → 501
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:46 → 138
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  3. XM_038541951.1 → XP_038397879.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S7C6, A0A8P0NDE2
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  4. XM_038541950.1 → XP_038397878.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S7C6, A0A8P0NDE2
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

RNA

  1. XR_005361815.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2609186..2746673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_547371.7 → XP_547371.4  nuclear receptor subfamily 5 group A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S725, A0A8C0S7V6, A0A8P0PBZ0
    Conserved Domains (2) summary
    cd07069
    Location:255 → 495
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:40 → 132
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  2. XM_038561243.1 → XP_038417171.1  nuclear receptor subfamily 5 group A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0S725, A0A8P0PS74
    Conserved Domains (2) summary
    cd07069
    Location:261 → 501
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:46 → 138
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  3. XM_038561263.1 → XP_038417191.1  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S7C6, A0A8P0NDE2
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

  4. XM_005622276.4 → XP_005622333.2  nuclear receptor subfamily 5 group A member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S7C6, A0A8P0NDE2
    Conserved Domains (2) summary
    cd07069
    Location:229 → 469
    NR_LBD_Lrh-1; The ligand binding domain of the liver receptor homolog-1, a member of nuclear receptor superfamily,
    cd07167
    Location:14 → 106
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers

RNA

  1. XR_005372292.1 RNA Sequence

Nucleotide Protein
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