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MYOG myogenin [ Canis lupus familiaris (dog) ]

Gene ID: 490224, updated on 5-Mar-2024

Summary

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Official Symbol
MYOGprovided by VGNC
Official Full Name
myogeninprovided by VGNC
Primary source
VGNC:VGNC:43580
See related
Ensembl:ENSCAFG00845014215
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (122772..125124)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (167989..170338)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (243050..245421)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (111008..113379)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (220521..222887)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene adenosine A1 receptor Neighboring gene uncharacterized LOC102152802 Neighboring gene 60S ribosomal protein L9-like Neighboring gene PTPRF interacting protein alpha 4 Neighboring gene transmembrane protein 183A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification and analysis of basic helix-loop-helix domains in dog, Canis lupus familiaris. Wang XH, et al. Mol Genet Genomics, 2015 Apr. PMID 25403511

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    122772..125124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670590.1 → XP_038526518.1  myogenin isoform X1

    UniProtKB/TrEMBL
    A0A8C0MCM5, A0A8C0R198, A0A8I3NSP2
    Related
    ENSCAFP00845020004.1, ENSCAFT00845025413.1
    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_038670591.1 → XP_038526519.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cl00081
    Location:81 → 119
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    111008..113379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038482593.1 → XP_038338521.1  myogenin isoform X1

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_038482594.1 → XP_038338522.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cl00081
    Location:81 → 119
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    220521..222887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038605870.1 → XP_038461798.1  myogenin isoform X1

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_038605871.1 → XP_038461799.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cl00081
    Location:81 → 119
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    243050..245421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541749.1 → XP_038397677.1  myogenin isoform X1

    UniProtKB/TrEMBL
    A0A8C0MCM5, A0A8C0R198, A0A8I3NSP2
    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_038541750.1 → XP_038397678.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cl00081
    Location:81 → 119
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    167989..170338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_547345.6 → XP_547345.2  myogenin isoform X1

    UniProtKB/TrEMBL
    A0A8C0MCM5, A0A8C0R198, A0A8I3NSP2
    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_005622161.3 → XP_005622218.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cl00081
    Location:81 → 119
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

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