U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNIP1 TNFAIP3 interacting protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 489178, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
TNIP1provided by VGNC
Official Full Name
TNFAIP3 interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:47676
See related
Ensembl:ENSCAFG00845005879
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (58588813..58638281)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (57902679..57951877)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (59008672..59057916)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (58406693..58455880)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (58505144..58554566)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095589 Neighboring gene U6 spliceosomal RNA Neighboring gene annexin A6 Neighboring gene zinc finger protein 569-like Neighboring gene glutathione peroxidase 3 Neighboring gene G2/mitotic-specific cyclin-B1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TNFAIP3-interacting protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    58588813..58638281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038663598.1 → XP_038519526.1  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_038663601.1 → XP_038519529.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_038663597.1 → XP_038519525.1  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Related
    ENSCAFP00845008187.1, ENSCAFT00845010524.1
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_038663599.1 → XP_038519527.1  TNFAIP3-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N145, A0A8P0PR15
    Related
    ENSCAFP00845008168.1, ENSCAFT00845010503.1
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_038663600.1 → XP_038519528.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Related
    ENSCAFP00845008102.1, ENSCAFT00845010426.1
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    58406693..58455880
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038473901.1 → XP_038329829.1  TNFAIP3-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_038473904.1 → XP_038329832.1  TNFAIP3-interacting protein 1 isoform X3

    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_038473900.1 → XP_038329828.1  TNFAIP3-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_038473902.1 → XP_038329830.1  TNFAIP3-interacting protein 1 isoform X2

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_038473903.1 → XP_038329831.1  TNFAIP3-interacting protein 1 isoform X3

    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    58505144..58554566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038599292.1 → XP_038455220.1  TNFAIP3-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_038599295.1 → XP_038455223.1  TNFAIP3-interacting protein 1 isoform X3

    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_038599291.1 → XP_038455219.1  TNFAIP3-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_038599293.1 → XP_038455221.1  TNFAIP3-interacting protein 1 isoform X2

    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_038599294.1 → XP_038455222.1  TNFAIP3-interacting protein 1 isoform X3

    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    59008672..59057916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038534991.1 → XP_038390919.1  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_038534994.1 → XP_038390922.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_038534990.1 → XP_038390918.1  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_038534992.1 → XP_038390920.1  TNFAIP3-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N145, A0A8P0PR15
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_038534993.1 → XP_038390921.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57902679..57951877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_546296.7 → XP_546296.3  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_022417790.2 → XP_022273498.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_038497141.1 → XP_038353069.1  TNFAIP3-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCM6, A0A8C0M6K9, A0A8I3MX76, A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  4. XM_038497158.1 → XP_038353086.1  TNFAIP3-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N145, A0A8P0PR15
    Conserved Domains (1) summary
    COG1196
    Location:196 → 517
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_038497168.1 → XP_038353096.1  TNFAIP3-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MZK6, A0A8P0SM62
    Conserved Domains (1) summary
    COG1196
    Location:143 → 464
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous