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E2F3 E2F transcription factor 3 [ Canis lupus familiaris (dog) ]

Gene ID: 488239, updated on 5-Mar-2024

Summary

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Official Symbol
E2F3provided by VGNC
Official Full Name
E2F transcription factor 3provided by VGNC
Primary source
VGNC:VGNC:40165
See related
Ensembl:ENSCAFG00845016633
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See E2F3 in Genome Data Viewer
Location:
chromosome: 35
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 35 NC_051839.1 (19123558..19197676)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 35 NC_006617.4 (18971644..19045676)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 35 NC_049256.1 (20416008..20490009)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 35 NC_049295.1 (18931701..19005696)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 35 NC_049776.1 (18996668..19070695)

Chromosome 35 - NC_051839.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093975 Neighboring gene uncharacterized LOC102157225 Neighboring gene uncharacterized LOC111094076 Neighboring gene uncharacterized LOC102151167

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2F3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051839.1 Reference ROS_Cfam_1.0

    Range
    19123558..19197676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038446473.1 → XP_038302401.1  transcription factor E2F3

    UniProtKB/TrEMBL
    A0A8C0NEA4, A0A8I3NRA3
    Related
    ENSCAFP00845023243.1, ENSCAFT00845029593.1
    Conserved Domains (2) summary
    cd14660
    Location:123 → 223
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 112
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049295.1 Alternate UMICH_Zoey_3.1

    Range
    18931701..19005696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038520612.1 → XP_038376540.1  transcription factor E2F3

    Conserved Domains (2) summary
    cd14660
    Location:123 → 223
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 112
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049776.1 Alternate UNSW_CanFamBas_1.0

    Range
    18996668..19070695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038648675.1 → XP_038504603.1  transcription factor E2F3

    Conserved Domains (2) summary
    cd14660
    Location:123 → 223
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 112
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049256.1 Alternate UU_Cfam_GSD_1.0

    Range
    20416008..20490009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038584265.1 → XP_038440193.1  transcription factor E2F3

    UniProtKB/TrEMBL
    A0A8C0NEA4, A0A8I3NRA3
    Conserved Domains (2) summary
    cd14660
    Location:123 → 223
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 112
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006617.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    18971644..19045676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005640067.4 → XP_005640124.1  transcription factor E2F3

    UniProtKB/TrEMBL
    A0A8C0NEA4, A0A8I3NRA3
    Conserved Domains (2) summary
    cd14660
    Location:123 → 223
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:49 → 112
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
Nucleotide Protein
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