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GTF2E1 general transcription factor IIE subunit 1 [ Canis lupus familiaris (dog) ]

Gene ID: 488002, updated on 5-Mar-2024

Summary

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Official Symbol
GTF2E1provided by VGNC
Official Full Name
general transcription factor IIE subunit 1provided by VGNC
Primary source
VGNC:VGNC:41544
See related
Ensembl:ENSCAFG00845019430
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 33
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (24347625..24447618)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (24136988..24236705)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (24752841..24852786)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (24148331..24248265)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (24188586..24288529)

Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102151423 Neighboring gene uncharacterized LOC119867336 Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene RAB, member of RAS oncogene family like 3 Neighboring gene syntaxin binding protein 5L Neighboring gene U6 spliceosomal RNA Neighboring gene DNA polymerase theta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription open complex formation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIE subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051837.1 Reference ROS_Cfam_1.0

    Range
    24347625..24447618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038445081.1 → XP_038301009.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  2. XM_038445085.1 → XP_038301013.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  3. XM_038445080.1 → XP_038301008.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  4. XM_038445088.1 → XP_038301016.1  general transcription factor IIE subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JXT1, A0A8C0PSF1, A0A8C0T8L9, A0A8I3P9H5
    Related
    ENSCAFP00845026825.1, ENSCAFT00845034268.1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  5. XM_038445086.1 → XP_038301014.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  6. XM_038445083.1 → XP_038301011.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  7. XM_038445084.1 → XP_038301012.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  8. XM_038445082.1 → XP_038301010.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  9. XM_038445087.1 → XP_038301015.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

RNA

  1. XR_005306397.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049293.1 Alternate UMICH_Zoey_3.1

    Range
    24148331..24248265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038519342.1 → XP_038375270.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  2. XM_038519346.1 → XP_038375274.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  3. XM_038519341.1 → XP_038375269.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  4. XM_038519349.1 → XP_038375277.1  general transcription factor IIE subunit 1 isoform X2

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  5. XM_038519347.1 → XP_038375275.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  6. XM_038519344.1 → XP_038375272.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  7. XM_038519345.1 → XP_038375273.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  8. XM_038519343.1 → XP_038375271.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  9. XM_038519348.1 → XP_038375276.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

RNA

  1. XR_005349462.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

    Range
    24188586..24288529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038647349.1 → XP_038503277.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  2. XM_038647353.1 → XP_038503281.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  3. XM_038647348.1 → XP_038503276.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  4. XM_038647356.1 → XP_038503284.1  general transcription factor IIE subunit 1 isoform X2

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  5. XM_038647354.1 → XP_038503282.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  6. XM_038647351.1 → XP_038503279.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  7. XM_038647352.1 → XP_038503280.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  8. XM_038647350.1 → XP_038503278.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  9. XM_038647355.1 → XP_038503283.1  general transcription factor IIE subunit 1 isoform X1

    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

RNA

  1. XR_005417049.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

    Range
    24752841..24852786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038582964.1 → XP_038438892.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  2. XM_038582968.1 → XP_038438896.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  3. XM_038582963.1 → XP_038438891.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  4. XM_038582971.1 → XP_038438899.1  general transcription factor IIE subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JXT1, A0A8C0PSF1, A0A8C0T8L9, A0A8I3P9H5
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  5. XM_038582969.1 → XP_038438897.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  6. XM_038582966.1 → XP_038438894.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  7. XM_038582967.1 → XP_038438895.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  8. XM_038582965.1 → XP_038438893.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  9. XM_038582970.1 → XP_038438898.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

RNA

  1. XR_005383374.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24136988..24236705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022413914.2 → XP_022269622.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  2. XM_014110226.3 → XP_013965701.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  3. XM_545124.7 → XP_545124.2  general transcription factor IIE subunit 1 isoform X1

    See identical proteins and their annotated locations for XP_545124.2

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  4. XM_005639545.4 → XP_005639602.1  general transcription factor IIE subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JXT1, A0A8C0PSF1, A0A8C0T8L9, A0A8I3P9H5
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  5. XM_014110224.3 → XP_013965699.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  6. XM_014110222.3 → XP_013965697.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  7. XM_022413915.2 → XP_022269623.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  8. XM_014110225.3 → XP_013965700.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

  9. XM_014110223.3 → XP_013965698.1  general transcription factor IIE subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PSF1
    Conserved Domains (2) summary
    smart00531
    Location:28 → 175
    TFIIE; Transcription initiation factor IIE
    pfam11521
    Location:365 → 438
    TFIIE-A_C; C-terminal general transcription factor TFIIE alpha

RNA

  1. XR_002622296.2 RNA Sequence

Nucleotide Protein
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