U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HTR6 5-hydroxytryptamine receptor 6 [ Canis lupus familiaris (dog) ]

Gene ID: 487402, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
HTR6provided by VGNC
Official Full Name
5-hydroxytryptamine receptor 6provided by VGNC
Primary source
VGNC:VGNC:41833
See related
Ensembl:ENSCAFG00845003213
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (79589890..79601165, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (75536323..75547597, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (78486607..78497882, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (76407980..76419252, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (77415288..77426563, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 186 Neighboring gene uncharacterized LOC111093751 Neighboring gene transmembrane and coiled-coil domains 4 Neighboring gene NBL1, DAN family BMP antagonist Neighboring gene uncharacterized LOC119870465 Neighboring gene mitochondrial contact site and cristae organizing system subunit 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
5-hydroxytryptamine receptor 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    79589890..79601165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660122.1 → XP_038516050.1  5-hydroxytryptamine receptor 6

    UniProtKB/TrEMBL
    A0A8C0QXJ6, A0A8C0RYS2, A0A8I3MN28, A0A8P0NLK0
    Related
    ENSCAFP00845004481.1, ENSCAFT00845005648.1
    Conserved Domains (1) summary
    cd15054
    Location:27 → 331
    7tmA_5-HT6; serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    76407980..76419252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038470909.1 → XP_038326837.1  5-hydroxytryptamine receptor 6

    Conserved Domains (1) summary
    cd15054
    Location:27 → 331
    7tmA_5-HT6; serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    77415288..77426563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038596030.1 → XP_038451958.1  5-hydroxytryptamine receptor 6

    Conserved Domains (1) summary
    cd15054
    Location:27 → 331
    7tmA_5-HT6; serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    78486607..78497882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038531780.1 → XP_038387708.1  5-hydroxytryptamine receptor 6

    UniProtKB/TrEMBL
    A0A8C0QXJ6, A0A8C0RYS2, A0A8I3MN28, A0A8P0NLK0
    Conserved Domains (1) summary
    cd15054
    Location:27 → 331
    7tmA_5-HT6; serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    75536323..75547597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_544528.6 → XP_544528.6  5-hydroxytryptamine receptor 6

    UniProtKB/TrEMBL
    A0A8C0QXJ6, A0A8C0RYS2, A0A8I3MN28, A0A8P0NLK0
    Conserved Domains (1) summary
    cd15054
    Location:27 → 331
    7tmA_5-HT6; serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous