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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051806.1 Reference ROS_Cfam_1.0
- Range
-
71844918..71923499 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038659647.1 → XP_038515575.1 LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase U isoform X1
- UniProtKB/TrEMBL
- A0A8C0MHD2, A0A8I3MW46, A0A8P0NDN5
- Related
- ENSCAFP00845010571.1, ENSCAFT00845013617.1
- Conserved Domains (6) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:896 → 971
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:943 → 1147
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1232 → 1438
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049262.1 Alternate UMICH_Zoey_3.1
- Range
-
68673740..68752383 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038470499.1 → XP_038326427.1 receptor-type tyrosine-protein phosphatase U isoform X3
- Conserved Domains (6) summary
-
- smart00137
Location:25 → 188
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:898 → 973
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:388 → 483
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:945 → 1149
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1234 → 1440
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:496 → 579
- fn3; Fibronectin type III domain
-
XM_038470502.1 → XP_038326430.1 receptor-type tyrosine-protein phosphatase U isoform X5
-
XM_038470498.1 → XP_038326426.1 receptor-type tyrosine-protein phosphatase U isoform X2
-
XM_038470501.1 → XP_038326429.1 receptor-type tyrosine-protein phosphatase U isoform X4
-
XM_038470500.1 → XP_038326428.1 receptor-type tyrosine-protein phosphatase U isoform X1
- Conserved Domains (6) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:896 → 971
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:943 → 1147
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1232 → 1438
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
-
XM_038470503.1 → XP_038326431.1 receptor-type tyrosine-protein phosphatase U isoform X6
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049743.1 Alternate UNSW_CanFamBas_1.0
- Range
-
69681824..69760389 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038595567.1 → XP_038451495.1 receptor-type tyrosine-protein phosphatase U isoform X8
-
XM_038595570.1 → XP_038451498.1 receptor-type tyrosine-protein phosphatase U isoform X10
-
XM_038595566.1 → XP_038451494.1 receptor-type tyrosine-protein phosphatase U isoform X7
-
XM_038595569.1 → XP_038451497.1 receptor-type tyrosine-protein phosphatase U isoform X9
-
XM_038595568.1 → XP_038451496.1 receptor-type tyrosine-protein phosphatase U isoform X1
-
XM_038595571.1 → XP_038451499.1 receptor-type tyrosine-protein phosphatase U isoform X11
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049223.1 Alternate UU_Cfam_GSD_1.0
- Range
-
70679504..70758203 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038531342.1 → XP_038387270.1 receptor-type tyrosine-protein phosphatase U isoform X13
- UniProtKB/TrEMBL
-
A0A8C0PPK9
- Conserved Domains (6) summary
-
- smart00137
Location:25 → 188
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:898 → 973
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:388 → 483
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:945 → 1149
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1234 → 1440
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:496 → 579
- fn3; Fibronectin type III domain
-
XM_038531345.1 → XP_038387273.1 receptor-type tyrosine-protein phosphatase U isoform X15
- UniProtKB/TrEMBL
-
A0A8C0MQP6
-
XM_038531341.1 → XP_038387269.1 receptor-type tyrosine-protein phosphatase U isoform X12
- UniProtKB/TrEMBL
- A0A8C0MDH9, A0A8P0PF37
-
XM_038531344.1 → XP_038387272.1 receptor-type tyrosine-protein phosphatase U isoform X14
- UniProtKB/TrEMBL
- A0A8C0MQP6, A0A8I3N6Z2, A0A8P0NSE2
-
XM_038531343.1 → XP_038387271.1 receptor-type tyrosine-protein phosphatase U isoform X1
- UniProtKB/TrEMBL
- A0A8C0MHD2, A0A8I3MW46, A0A8P0NDN5
- Conserved Domains (6) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:896 → 971
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:943 → 1147
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1232 → 1438
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
-
XM_038531346.1 → XP_038387274.1 receptor-type tyrosine-protein phosphatase U isoform X16
- UniProtKB/TrEMBL
-
A0A8C0MDH9
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
67861226..67939839 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038462126.1 → XP_038318054.1 receptor-type tyrosine-protein phosphatase U isoform X18
- UniProtKB/TrEMBL
-
A0A8C0PPK9
- Conserved Domains (6) summary
-
- smart00137
Location:25 → 188
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:898 → 973
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:388 → 483
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:945 → 1149
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1234 → 1440
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:496 → 579
- fn3; Fibronectin type III domain
-
XM_005617687.4 → XP_005617744.1 receptor-type tyrosine-protein phosphatase U isoform X20
- UniProtKB/TrEMBL
-
A0A8C0MQP6
- Conserved Domains (5) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00047
Location:1195 → 1428
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
- pfam00102
Location:913 → 1133
- Y_phosphatase; Protein-tyrosine phosphatase
-
XM_005617685.4 → XP_005617742.1 receptor-type tyrosine-protein phosphatase U isoform X17
- UniProtKB/TrEMBL
- A0A8C0MDH9, A0A8P0PF37
- Conserved Domains (5) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00047
Location:1211 → 1444
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
- pfam00102
Location:923 → 1149
- Y_phosphatase; Protein-tyrosine phosphatase
-
XM_005617686.4 → XP_005617743.1 receptor-type tyrosine-protein phosphatase U isoform X19
- UniProtKB/TrEMBL
- A0A8C0MQP6, A0A8I3N6Z2, A0A8P0NSE2
- Conserved Domains (5) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00047
Location:1201 → 1434
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
- pfam00102
Location:913 → 1139
- Y_phosphatase; Protein-tyrosine phosphatase
-
XM_847178.5 → XP_852271.1 receptor-type tyrosine-protein phosphatase U isoform X1
- UniProtKB/TrEMBL
- A0A8C0MHD2, A0A8I3MW46, A0A8P0NDN5
- Conserved Domains (6) summary
-
- smart00137
Location:22 → 186
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- COG2609
Location:896 → 971
- AceE; Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]
- cd00063
Location:386 → 481
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14632
Location:943 → 1147
- R-PTPc-U-1; catalytic domain of receptor-type tyrosine-protein phosphatase U, repeat 1
- cd14637
Location:1232 → 1438
- R-PTPc-U-2; PTP domain of receptor-type tyrosine-protein phosphatase U, repeat 2
- pfam00041
Location:494 → 577
- fn3; Fibronectin type III domain
-
XM_005617688.4 → XP_005617745.1 receptor-type tyrosine-protein phosphatase U isoform X21
- UniProtKB/TrEMBL
-
A0A8C0MDH9
- Conserved Domains (5) summary
-
- smart00137
Location:1 → 114
- MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
- cd00047
Location:1139 → 1372
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:314 → 409
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:422 → 505
- fn3; Fibronectin type III domain
- pfam00102
Location:851 → 1077
- Y_phosphatase; Protein-tyrosine phosphatase