U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

USP6NL USP6 N-terminal like [ Canis lupus familiaris (dog) ]

Gene ID: 487132, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
USP6NLprovided by VGNC
Official Full Name
USP6 N-terminal likeprovided by VGNC
Primary source
VGNC:VGNC:48204
See related
Ensembl:ENSCAFG00845000518
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (25095553..25264511)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (21754223..21923313)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (23779642..23949141)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (22221258..22389999)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (23064607..23233746)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119869989 Neighboring gene enoyl-CoA hydratase domain containing 3 Neighboring gene uncharacterized LOC102152333 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119870160 Neighboring gene uncharacterized LOC119869990 Neighboring gene uncharacterized LOC111091590 Neighboring gene CUGBP Elav-like family member 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
USP6 N-terminal-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    25095553..25264511
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038658449.1 → XP_038514377.1  USP6 N-terminal-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q2F5, A0A8C0QIQ5, A0A8I3MBP1, A0A8I3ML48, A0A8P0NZ13
    Related
    ENSCAFP00845000630.1, ENSCAFT00845000838.1
    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_038658448.1 → XP_038514376.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NVG4, A0A8C0RY45, A0A8I3MDC6
    Related
    ENSCAFP00845000671.1, ENSCAFT00845000897.1
    Conserved Domains (1) summary
    smart00164
    Location:118 → 333
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_038658450.1 → XP_038514378.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0Q462
    Conserved Domains (1) summary
    smart00164
    Location:18 → 233
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    22221258..22389999
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038469388.1 → XP_038325316.1  USP6 N-terminal-like protein isoform X2

    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_038469387.1 → XP_038325315.1  USP6 N-terminal-like protein isoform X1

    Conserved Domains (1) summary
    smart00164
    Location:118 → 333
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_038469389.1 → XP_038325317.1  USP6 N-terminal-like protein isoform X3

    Conserved Domains (1) summary
    smart00164
    Location:18 → 233
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    23064607..23233746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594392.1 → XP_038450320.1  USP6 N-terminal-like protein isoform X2

    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_038594391.1 → XP_038450319.1  USP6 N-terminal-like protein isoform X1

    Conserved Domains (1) summary
    smart00164
    Location:118 → 333
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_038594393.1 → XP_038450321.1  USP6 N-terminal-like protein isoform X3

    Conserved Domains (1) summary
    smart00164
    Location:18 → 233
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    23779642..23949141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038530140.1 → XP_038386068.1  USP6 N-terminal-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q2F5, A0A8C0QIQ5, A0A8I3MBP1, A0A8I3ML48, A0A8P0NZ13
    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_038530139.1 → XP_038386067.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NVG4, A0A8C0RY45, A0A8I3MDC6
    Conserved Domains (1) summary
    smart00164
    Location:118 → 333
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_038530141.1 → XP_038386069.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0Q462
    Conserved Domains (1) summary
    smart00164
    Location:18 → 233
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21754223..21923313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005617149.3 → XP_005617206.1  USP6 N-terminal-like protein isoform X2

    See identical proteins and their annotated locations for XP_005617206.1

    UniProtKB/TrEMBL
    A0A8C0Q2F5, A0A8C0QIQ5, A0A8I3MBP1, A0A8I3ML48, A0A8P0NZ13
    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_022407860.2 → XP_022263568.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NVG4, A0A8C0RY45, A0A8I3MDC6
    Conserved Domains (1) summary
    smart00164
    Location:118 → 333
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_022407869.2 → XP_022263577.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0Q462
    Conserved Domains (1) summary
    smart00164
    Location:18 → 233
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous