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HDAC7 histone deacetylase 7 [ Canis lupus familiaris (dog) ]

Gene ID: 486589, updated on 5-Mar-2024

Summary

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Official Symbol
HDAC7provided by VGNC
Official Full Name
histone deacetylase 7provided by VGNC
Primary source
VGNC:VGNC:49112
See related
Ensembl:ENSCAFG00845024987
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HDAC7 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
30
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (6998714..7036476)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (39338114..39375845, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (39626577..39664313, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (6935774..6973459)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (6971287..7008847)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866303 Neighboring gene vitamin D receptor Neighboring gene uncharacterized LOC111092909 Neighboring gene uncharacterized LOC119863949 Neighboring gene uncharacterized LOC119866385 Neighboring gene solute carrier family 48 member 1 Neighboring gene Rap guanine nucleotide exchange factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase 7
XP_013964038.1
XP_013964040.1
XP_038294296.1
XP_038294298.1
XP_038294299.1
XP_038294300.1
XP_038294301.1
XP_038294302.1
XP_038315962.1
XP_038315963.1
XP_038315964.1
XP_038315965.1
XP_038369006.1
XP_038369007.1
XP_038369008.1
XP_038369009.1
XP_038369010.1
XP_038369011.1
XP_038433385.1
XP_038433386.1
XP_038433387.1
XP_038433388.1
XP_038433389.1
XP_038433390.1
XP_038496767.1
XP_038496768.1
XP_038496769.1
XP_038496770.1
XP_038496771.1
XP_038496772.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    6998714..7036476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438368.1 → XP_038294296.1  histone deacetylase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8I3PXZ0, A0A8I3Q6K2
    Related
    ENSCAFP00845035016.1, ENSCAFT00845044689.1
    Conserved Domains (2) summary
    cd10008
    Location:556 → 933
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 453
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038438370.1 → XP_038294298.1  histone deacetylase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0T4A0
    Related
    ENSCAFP00845034590.1, ENSCAFT00845044143.1
    Conserved Domains (2) summary
    cd10008
    Location:519 → 896
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 416
    PHA03247; large tegument protein UL36; Provisional

  3. XM_038438373.1 → XP_038294301.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PUW1, A0A8I3PXZ0
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  4. XM_038438372.1 → XP_038294300.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PUW1, A0A8I3PXZ0
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  5. XM_038438371.1 → XP_038294299.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PUW1, A0A8I3PXZ0
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  6. XM_038438374.1 → XP_038294302.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PUW1, A0A8I3PXZ0
    Related
    ENSCAFP00845035229.1, ENSCAFT00845044954.1
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    6935774..6973459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513078.1 → XP_038369006.1  histone deacetylase 7 isoform X1

    Conserved Domains (2) summary
    cd10008
    Location:556 → 933
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 453
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038513079.1 → XP_038369007.1  histone deacetylase 7 isoform X2

    Conserved Domains (2) summary
    cd10008
    Location:519 → 896
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 416
    PHA03247; large tegument protein UL36; Provisional

  3. XM_038513082.1 → XP_038369010.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  4. XM_038513081.1 → XP_038369009.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  5. XM_038513080.1 → XP_038369008.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  6. XM_038513083.1 → XP_038369011.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    6971287..7008847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640839.1 → XP_038496767.1  histone deacetylase 7 isoform X1

    Conserved Domains (2) summary
    cd10008
    Location:556 → 933
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 453
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038640840.1 → XP_038496768.1  histone deacetylase 7 isoform X2

    Conserved Domains (2) summary
    cd10008
    Location:519 → 896
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 416
    PHA03247; large tegument protein UL36; Provisional

  3. XM_038640843.1 → XP_038496771.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  4. XM_038640842.1 → XP_038496770.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  5. XM_038640841.1 → XP_038496769.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  6. XM_038640844.1 → XP_038496772.1  histone deacetylase 7 isoform X3

    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    39626577..39664313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577458.1 → XP_038433386.1  histone deacetylase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KB35, A0A8C0T4A0
    Conserved Domains (2) summary
    cd10008
    Location:519 → 896
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 416
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038577457.1 → XP_038433385.1  histone deacetylase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PB04, A0A8C0QZ96, A0A8C0RSH1, A0A8P0NBL6, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:556 → 933
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 453
    PHA03247; large tegument protein UL36; Provisional

  3. XM_038577461.1 → XP_038433389.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  4. XM_038577460.1 → XP_038433388.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  5. XM_038577459.1 → XP_038433387.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  6. XM_038577462.1 → XP_038433390.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    39338114..39375845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038460035.1 → XP_038315963.1  histone deacetylase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KB35, A0A8C0T4A0
    Conserved Domains (2) summary
    cd10008
    Location:519 → 896
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 416
    PHA03247; large tegument protein UL36; Provisional

  2. XM_038460034.1 → XP_038315962.1  histone deacetylase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PB04, A0A8C0QZ96, A0A8C0RSH1, A0A8P0NBL6, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:556 → 933
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:4 → 453
    PHA03247; large tegument protein UL36; Provisional

  3. XM_038460037.1 → XP_038315965.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  4. XM_038460036.1 → XP_038315964.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  5. XM_014108563.3 → XP_013964038.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional

  6. XM_014108565.3 → XP_013964040.1  histone deacetylase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KDS8, A0A8C0PB04, A0A8P0P3P4, A0A8P0TG93
    Conserved Domains (2) summary
    cd10008
    Location:517 → 894
    HDAC7; Histone deacetylase 7
    PHA03247
    Location:98 → 403
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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