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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051830.1 Reference ROS_Cfam_1.0
- Range
-
24660928..24679758 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038437283.1 → XP_038293211.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:606 → 627
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 603
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038437282.1 → XP_038293210.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A8C0NNF3, A0A8I3PCN5
- Related
- ENSCAFP00845031714.1, ENSCAFT00845040505.1
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:607 → 628
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 604
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038437284.1 → XP_038293212.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A8C0NLJ0, A0A8C0QTE2, A0A8I3PGI1
- Related
- ENSCAFP00845031688.1, ENSCAFT00845040472.1
- Conserved Domains (7) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:561 → 582
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
- pfam16637
Location:492 → 558
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038437285.1 → XP_038293213.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
- UniProtKB/TrEMBL
- A0A8C0TL55, A0A8I3PCQ5
- Conserved Domains (5) summary
-
- COG5048
Location:381 → 451
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:329 → 406
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
-
XM_038437286.1 → XP_038293214.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X5
- UniProtKB/TrEMBL
- A0A8C0JJJ4, A0A8C0NML8, A0A8C0TL55, A0A8I3PCQ5, A0A8I3PTY5
- Related
- ENSCAFP00845031764.1, ENSCAFT00845040580.1
- Conserved Domains (3) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049286.1 Alternate UMICH_Zoey_3.1
- Range
-
24364111..24382938 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038512179.1 → XP_038368107.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:606 → 627
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 603
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038512178.1 → XP_038368106.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:607 → 628
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 604
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038512180.1 → XP_038368108.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
- Conserved Domains (7) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:561 → 582
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
- pfam16637
Location:492 → 558
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038512181.1 → XP_038368109.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
- Conserved Domains (5) summary
-
- COG5048
Location:381 → 451
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:329 → 406
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
-
XM_038512182.1 → XP_038368110.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X5
- Conserved Domains (3) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049767.1 Alternate UNSW_CanFamBas_1.0
- Range
-
24626189..24645033 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038639875.1 → XP_038495803.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
-
XM_038639874.1 → XP_038495802.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
-
XM_038639876.1 → XP_038495804.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
-
XM_038639877.1 → XP_038495805.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
-
XM_038639878.1 → XP_038495806.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X5
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049247.1 Alternate UU_Cfam_GSD_1.0
- Range
-
24687638..24706466 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038575680.1 → XP_038431608.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:606 → 627
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 603
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038575679.1 → XP_038431607.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
- UniProtKB/TrEMBL
- A0A8C0NNF3, A0A8I3PCN5
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:607 → 628
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 604
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038575681.1 → XP_038431609.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
- UniProtKB/TrEMBL
- A0A8C0NLJ0, A0A8C0QTE2, A0A8I3PGI1
- Conserved Domains (7) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:561 → 582
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
- pfam16637
Location:492 → 558
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_038575682.1 → XP_038431610.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
- UniProtKB/TrEMBL
- A0A8C0TL55, A0A8I3PCQ5
- Conserved Domains (5) summary
-
- COG5048
Location:381 → 451
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:329 → 406
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
-
XM_038575683.1 → XP_038431611.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X5
- UniProtKB/TrEMBL
- A0A8C0JJJ4, A0A8C0NML8, A0A8C0TL55, A0A8I3PCQ5, A0A8I3PTY5
- Conserved Domains (3) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
24147525..24166353 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_014107794.3 → XP_013963269.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:606 → 627
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 603
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_003433403.5 → XP_003433451.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
See identical proteins and their annotated locations for XP_003433451.1
- UniProtKB/TrEMBL
- A0A8C0NNF3, A0A8I3PCN5
- Conserved Domains (6) summary
-
- COG5048
Location:381 → 518
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:607 → 628
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam16637
Location:536 → 604
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_861146.6 → XP_866239.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
See identical proteins and their annotated locations for XP_866239.1
- UniProtKB/TrEMBL
- A0A8C0NLJ0, A0A8C0QTE2, A0A8I3PGI1
- Conserved Domains (7) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:561 → 582
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam00096
Location:357 → 377
- zf-C2H2; Zinc finger, C2H2 type
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
- pfam16637
Location:492 → 558
- zf-C2H2_assoc3; Putative zinc-finger between two C2H2 zinc-fingers on Patz
-
XM_003433404.5 → XP_003433452.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
See identical proteins and their annotated locations for XP_003433452.1
- UniProtKB/TrEMBL
- A0A8C0TL55, A0A8I3PCQ5
- Conserved Domains (5) summary
-
- COG5048
Location:381 → 451
- COG5048; FOG: Zn-finger [General function prediction only]
- COG5189
Location:329 → 406
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)
- pfam13912
Location:442 → 467
- zf-C2H2_6; C2H2-type zinc finger
-
XM_861131.6 → XP_866224.1 POZ-, AT hook-, and zinc finger-containing protein 1 isoform X5
See identical proteins and their annotated locations for XP_866224.1
- UniProtKB/TrEMBL
- A0A8C0JJJ4, A0A8C0NML8, A0A8C0TL55, A0A8I3PCQ5, A0A8I3PTY5
- Conserved Domains (3) summary
-
- COG5189
Location:379 → 436
- SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
- sd00017
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- cd18207
Location:14 → 162
- BTB_POZ_ZBTB19_PATZ1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in POZ-, AT hook-, and zinc finger-containing protein 1 (PATZ1)