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LMNB2 lamin B2 [ Canis lupus familiaris (dog) ]

Gene ID: 485070, updated on 5-Mar-2024

Summary

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Official Symbol
LMNB2provided by VGNC
Official Full Name
lamin B2provided by VGNC
Primary source
VGNC:VGNC:42719
See related
Ensembl:ENSCAFG00845011756
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (57379149..57396719)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (56441797..56459358)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (57116796..57134399)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (56431395..56448956)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (56916504..56934153)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864596 Neighboring gene uncharacterized LOC119864786 Neighboring gene translocase of inner mitochondrial membrane 13 Neighboring gene transmembrane serine protease 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
lamin-B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    57379149..57396719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038429215.1 → XP_038285143.1  lamin-B2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Related
    ENSCAFP00845016492.1, ENSCAFT00845020987.1
    Conserved Domains (2) summary
    pfam00038
    Location:25 → 381
    Filament; Intermediate filament protein
    pfam00932
    Location:451 → 558
    LTD; Lamin Tail Domain

  2. XM_038429216.1 → XP_038285144.1  lamin-B2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:20 → 332
    Filament; Intermediate filament protein
    pfam00932
    Location:402 → 509
    LTD; Lamin Tail Domain

  3. XM_038429217.1 → XP_038285145.1  lamin-B2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:13 → 326
    Filament; Intermediate filament protein
    pfam00932
    Location:396 → 503
    LTD; Lamin Tail Domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    56431395..56448956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504748.1 → XP_038360676.1  lamin-B2 isoform X1

  2. XM_038504749.1 → XP_038360677.1  lamin-B2 isoform X2

  3. XM_038504750.1 → XP_038360678.1  lamin-B2 isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    56916504..56934153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038632011.1 → XP_038487939.1  lamin-B2 isoform X4

  2. XM_038632012.1 → XP_038487940.1  lamin-B2 isoform X5

  3. XM_038632013.1 → XP_038487941.1  lamin-B2 isoform X6

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    57116796..57134399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567889.1 → XP_038423817.1  lamin-B2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:25 → 381
    Filament; Intermediate filament protein
    pfam00932
    Location:451 → 558
    LTD; Lamin Tail Domain

  2. XM_038567890.1 → XP_038423818.1  lamin-B2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:20 → 332
    Filament; Intermediate filament protein
    pfam00932
    Location:402 → 509
    LTD; Lamin Tail Domain

  3. XM_038567891.1 → XP_038423819.1  lamin-B2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:13 → 326
    Filament; Intermediate filament protein
    pfam00932
    Location:396 → 503
    LTD; Lamin Tail Domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    56441797..56459358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455625.1 → XP_038311553.1  lamin-B2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:25 → 381
    Filament; Intermediate filament protein
    pfam00932
    Location:451 → 558
    LTD; Lamin Tail Domain

  2. XM_038455626.1 → XP_038311554.1  lamin-B2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:20 → 332
    Filament; Intermediate filament protein
    pfam00932
    Location:402 → 509
    LTD; Lamin Tail Domain

  3. XM_014121833.3 → XP_013977308.2  lamin-B2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RFM4, A0A8P0SN76
    Conserved Domains (2) summary
    pfam00038
    Location:13 → 326
    Filament; Intermediate filament protein
    pfam00932
    Location:396 → 503
    LTD; Lamin Tail Domain
Nucleotide Protein
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