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CARM1 coactivator associated arginine methyltransferase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 484947, updated on 5-Mar-2024

Summary

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Official Symbol
CARM1provided by VGNC
Official Full Name
coactivator associated arginine methyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:38721
See related
Ensembl:ENSCAFG00845022768
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (50850535..50894856, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (50201812..50245875, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (50728777..50772884, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (50059887..50103936, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (50487176..50531447, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864744 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 Neighboring gene uncharacterized LOC111091380 Neighboring gene translocase of inner mitochondrial membrane 29 Neighboring gene Yip1 domain family member 2 Neighboring gene chromosome 20 C19orf38 homolog Neighboring gene uncharacterized LOC119864746 Neighboring gene transmembrane p24 trafficking protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-arginine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-arginine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-arginine methyltransferase CARM1
XP_022262753.1
XP_038284529.1
XP_038284530.1
XP_038284531.1
XP_038284532.1
XP_038311123.1
XP_038311124.1
XP_038311125.1
XP_038360168.1
XP_038360169.1
XP_038360170.1
XP_038360171.1
XP_038423195.1
XP_038423196.1
XP_038423197.1
XP_038423198.1
XP_038487346.1
XP_038487347.1
XP_038487348.1
XP_038487349.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    50850535..50894856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428603.1 → XP_038284531.1  histone-arginine methyltransferase CARM1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_038428602.1 → XP_038284530.1  histone-arginine methyltransferase CARM1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0SZV9, A0A8I3PCS1
    Related
    ENSCAFP00845031492.1, ENSCAFT00845040208.1
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  3. XM_038428601.1 → XP_038284529.1  histone-arginine methyltransferase CARM1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0Z0U6, A0A8I3PD11
    Related
    ENSCAFP00845031588.1, ENSCAFT00845040332.1
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  4. XM_038428604.1 → XP_038284532.1  histone-arginine methyltransferase CARM1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:122 → 217
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    cl17171
    Location:9 → 72
    PH-like; Pleckstrin homology-like domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    50059887..50103936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504242.1 → XP_038360170.1  histone-arginine methyltransferase CARM1 isoform X3

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_038504241.1 → XP_038360169.1  histone-arginine methyltransferase CARM1 isoform X2

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  3. XM_038504240.1 → XP_038360168.1  histone-arginine methyltransferase CARM1 isoform X1

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  4. XM_038504243.1 → XP_038360171.1  histone-arginine methyltransferase CARM1 isoform X4

    Conserved Domains (2) summary
    cd02440
    Location:122 → 217
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    cl17171
    Location:9 → 72
    PH-like; Pleckstrin homology-like domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    50487176..50531447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631420.1 → XP_038487348.1  histone-arginine methyltransferase CARM1 isoform X3

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_038631419.1 → XP_038487347.1  histone-arginine methyltransferase CARM1 isoform X2

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  3. XM_038631418.1 → XP_038487346.1  histone-arginine methyltransferase CARM1 isoform X1

    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  4. XM_038631421.1 → XP_038487349.1  histone-arginine methyltransferase CARM1 isoform X4

    Conserved Domains (2) summary
    cd02440
    Location:122 → 217
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    cl17171
    Location:9 → 72
    PH-like; Pleckstrin homology-like domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    50728777..50772884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567269.1 → XP_038423197.1  histone-arginine methyltransferase CARM1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_038567268.1 → XP_038423196.1  histone-arginine methyltransferase CARM1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0SZV9, A0A8I3PCS1
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  3. XM_038567267.1 → XP_038423195.1  histone-arginine methyltransferase CARM1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0Z0U6, A0A8I3PD11
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  4. XM_038567270.1 → XP_038423198.1  histone-arginine methyltransferase CARM1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:122 → 217
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    cl17171
    Location:9 → 72
    PH-like; Pleckstrin homology-like domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50201812..50245875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455197.1 → XP_038311125.1  histone-arginine methyltransferase CARM1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  2. XM_038455196.1 → XP_038311124.1  histone-arginine methyltransferase CARM1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0SZV9, A0A8I3PCS1
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  3. XM_038455195.1 → XP_038311123.1  histone-arginine methyltransferase CARM1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LP11, A0A8C0Z0U6, A0A8I3PD11
    Conserved Domains (2) summary
    cd02440
    Location:188 → 283
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    pfam11531
    Location:34 → 138
    CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

  4. XM_022407045.2 → XP_022262753.1  histone-arginine methyltransferase CARM1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LP11
    Conserved Domains (2) summary
    cd02440
    Location:122 → 217
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    cl17171
    Location:9 → 72
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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