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SLC25A20 solute carrier family 25 member 20 [ Canis lupus familiaris (dog) ]

Gene ID: 484774, updated on 22-Jan-2024

Summary

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Official Symbol
SLC25A20provided by VGNC
Official Full Name
solute carrier family 25 member 20provided by VGNC
Primary source
VGNC:VGNC:46299
See related
Ensembl:ENSCAFG00845029742
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (40601674..40627761)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (40161526..40188235)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (39967112..39993969)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (40370902..40397702)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene cAMP-dependent protein kinase type II-alpha regulatory subunit-like Neighboring gene mitochondrial carnitine/acylcarnitine carrier protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein
Names
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
XP_022262467.1
XP_038283755.1
XP_038283756.1
XP_038359424.1
XP_038359425.1
XP_038486582.1
XP_038486583.1
XP_863142.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    40601674..40627761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038427827.1 → XP_038283755.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3QKS0, A0A8I3SCF5
    Related
    ENSCAFP00845041389.1, ENSCAFT00845052727.1
    Conserved Domains (1) summary
    pfam00153
    Location:6 → 103
    Mito_carr; Mitochondrial carrier protein

  2. XM_038427828.1 → XP_038283756.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    UniProtKB/TrEMBL
    A0A8I3QW47
    Conserved Domains (1) summary
    pfam00153
    Location:56 → 148
    Mito_carr; Mitochondrial carrier protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    39967112..39993969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038503496.1 → XP_038359424.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_038503497.1 → XP_038359425.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    40370902..40397702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038630654.1 → XP_038486582.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X5

    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_038630655.1 → XP_038486583.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X6

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    40161526..40188235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_858049.6 → XP_863142.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X7

    UniProtKB/TrEMBL
    A0A8C0L597, A0A8C0TDJ2, A0A8I3QW07, A0A8I3SCF5
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_022406759.2 → XP_022262467.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X8

    UniProtKB/TrEMBL
    A0A8I3QW47
    Conserved Domains (1) summary
    pfam00153
    Location:56 → 148
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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