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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051813.1 Reference ROS_Cfam_1.0
- Range
-
5495318..5525359 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038675704.1 → XP_038531632.1 integrin beta-4 isoform X3
- UniProtKB/TrEMBL
-
A0A8C0JSK7
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1129 → 1209
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038675702.1 → XP_038531630.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0Q140, A0A8I3PGV0
- Related
- ENSCAFP00845033273.1, ENSCAFT00845042441.1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038675703.1 → XP_038531631.1 integrin beta-4 isoform X2
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8I3PVX7
- Related
- ENSCAFP00845033708.1, ENSCAFT00845042993.1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1458 → 1548
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1572 → 1656
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038675701.1 → XP_038531629.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0Q140, A0A8I3PGV0
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049269.1 Alternate UMICH_Zoey_3.1
- Range
-
5534766..5564815 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038484898.1 → XP_038340826.1 integrin beta-4 isoform X3
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1129 → 1209
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038484896.1 → XP_038340824.1 integrin beta-4 isoform X1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038484897.1 → XP_038340825.1 integrin beta-4 isoform X2
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1458 → 1548
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1572 → 1656
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038484895.1 → XP_038340823.1 integrin beta-4 isoform X1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049750.1 Alternate UNSW_CanFamBas_1.0
- Range
-
5644907..5674940 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038610577.1 → XP_038466505.1 integrin beta-4 isoform X3
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1129 → 1209
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038610575.1 → XP_038466503.1 integrin beta-4 isoform X1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038610576.1 → XP_038466504.1 integrin beta-4 isoform X2
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1458 → 1548
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1572 → 1656
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038610574.1 → XP_038466502.1 integrin beta-4 isoform X1
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049230.1 Alternate UU_Cfam_GSD_1.0
- Range
-
5705723..5735767 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038546582.1 → XP_038402510.1 integrin beta-4 isoform X3
- UniProtKB/TrEMBL
-
A0A8C0JSK7
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1129 → 1209
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038546580.1 → XP_038402508.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0Q140, A0A8I3PGV0
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038546581.1 → XP_038402509.1 integrin beta-4 isoform X2
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8I3PVX7
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1458 → 1548
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1572 → 1656
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038546579.1 → XP_038402507.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0Q140, A0A8I3PGV0
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
5504986..5534992 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038625479.1 → XP_038481407.1 integrin beta-4 isoform X3
- UniProtKB/TrEMBL
-
A0A8C0JSK7
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1129 → 1209
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038625467.1 → XP_038481395.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0MHF7, A0A8P0TIV0
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038625476.1 → XP_038481404.1 integrin beta-4 isoform X2
- UniProtKB/TrEMBL
- A0A8C0M6I2, A0A8P0N7M4, A0A8P0NPT5
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1458 → 1548
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1572 → 1656
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_038625462.1 → XP_038481390.1 integrin beta-4 isoform X1
- UniProtKB/TrEMBL
- A0A8C0JSK7, A0A8C0MHF7, A0A8P0TIV0
- Conserved Domains (6) summary
-
- smart00237
Location:991 → 1085
- Calx_beta; Domains in Na-Ca exchangers and integrin-beta4
- cd00063
Location:1511 → 1601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:1625 → 1709
- fn3; Fibronectin type III domain
- pfam07965
Location:627 → 708
- Integrin_B_tail; Integrin beta tail domain
- pfam18372
Location:458 → 486
- I-EGF_1; Integrin beta epidermal growth factor like domain 1
- cl00057
Location:37 → 454
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...