U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GLI3 GLI family zinc finger 3 [ Canis lupus familiaris (dog) ]

Gene ID: 483244, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
GLI3provided by VGNC
Official Full Name
GLI family zinc finger 3provided by VGNC
Primary source
VGNC:VGNC:41258
See related
Ensembl:ENSCAFG00845018240
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 18
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (7847548..8118213)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (7651291..7921706)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (7912805..8183294)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (7829563..8099968)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (7798494..8068961)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864095 Neighboring gene uncharacterized LOC119864159 Neighboring gene uncharacterized LOC119864158 Neighboring gene uncharacterized LOC119864160 Neighboring gene uncharacterized LOC111090866 Neighboring gene uncharacterized LOC119864096 Neighboring gene uncharacterized LOC119864097

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein GLI3; LOW QUALITY PROTEIN: transcriptional activator GLI3; transcriptional activator GLI3
Names
GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    7847548..8118213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038423703.1 → XP_038279631.1  transcriptional activator GLI3

    UniProtKB/TrEMBL
    A0A8C0LC73, A0A8C0S0Q7, A0A8I3P2B2
    Related
    ENSCAFP00845025228.1, ENSCAFT00845032272.1
    Conserved Domains (4) summary
    COG5048
    Location:278 → 626
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:541 → 631
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    PRK07764
    Location:1191 → 1306
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    sd00017
    Location:547 → 569
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    7829563..8099968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038500069.1 → XP_038355997.1  transcriptional activator GLI3

    Conserved Domains (4) summary
    COG5048
    Location:278 → 626
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:541 → 631
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    PRK07764
    Location:1191 → 1306
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    sd00017
    Location:547 → 569
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    7798494..8068961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038626733.1 → XP_038482661.1  LOW QUALITY PROTEIN: transcriptional activator GLI3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    7912805..8183294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038562653.1 → XP_038418581.1  transcriptional activator GLI3

    UniProtKB/TrEMBL
    A0A8C0LC73, A0A8C0S0Q7, A0A8I3P2B2
    Conserved Domains (4) summary
    COG5048
    Location:278 → 626
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:541 → 631
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    PRK07764
    Location:1191 → 1306
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    sd00017
    Location:547 → 569
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7651291..7921706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038454031.1 → XP_038309959.1  transcriptional activator GLI3

    UniProtKB/TrEMBL
    A0A8C0LC73, A0A8P0NQW6
    Conserved Domains (4) summary
    COG5048
    Location:278 → 626
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:541 → 631
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    PRK07764
    Location:1191 → 1306
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    sd00017
    Location:547 → 569
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous