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CYP26B1 cytochrome P450 family 26 subfamily B member 1 [ Canis lupus familiaris (dog) ]

Gene ID: 483120, updated on 5-Mar-2024

Summary

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Official Symbol
CYP26B1provided by VGNC
Official Full Name
cytochrome P450 family 26 subfamily B member 1provided by VGNC
Primary source
VGNC:VGNC:50344
See related
Ensembl:ENSCAFG00845019592
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CYP26B1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (51501857..51522773)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (50280509..50301422)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (51150622..51171524)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (50510776..50531647)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (50576538..50597422)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 6B Neighboring gene uncharacterized LOC111090663 Neighboring gene uncharacterized LOC102154777 Neighboring gene uncharacterized LOC111090666 Neighboring gene uncharacterized LOC111090667

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression of CYP26b1 and related retinoic acid signalling molecules in young, peripubertal and adult dog testis. Kasimanickam VR, et al. Reprod Domest Anim, 2013 Feb. PMID 22712632

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The expression patterns of CYP26b1 and retinoic acid signalling molecules through sex maturation stages are reported.
    Title: Expression of CYP26b1 and related retinoic acid signalling molecules in young, peripubertal and adult dog testis.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome P450 26B1
Names
cytochrome P450, family 26, subfamily B, polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    51501857..51522773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038691753.1 → XP_038547681.1  cytochrome P450 26B1 isoform X2

    Conserved Domains (1) summary
    cl41757
    Location:37 → 461
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_038691752.1 → XP_038547680.1  cytochrome P450 26B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PD95, A0A8C0QZX5, A0A8C0R073, A0A8C0T1I2, A0A8I3P615, A0A8I3PB12
    Related
    ENSCAFP00845027125.1, ENSCAFT00845034631.1
    Conserved Domains (1) summary
    cd20637
    Location:60 → 490
    CYP26B1; cytochrome P450 family 26, subfamily B, polypeptide 1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    50510776..50531647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038499194.1 → XP_038355122.1  cytochrome P450 26B1 isoform X2

    Conserved Domains (1) summary
    cl41757
    Location:37 → 461
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_038499193.1 → XP_038355121.1  cytochrome P450 26B1 isoform X1

    Conserved Domains (1) summary
    cd20637
    Location:60 → 490
    CYP26B1; cytochrome P450 family 26, subfamily B, polypeptide 1

  3. XM_038499192.1 → XP_038355120.1  cytochrome P450 26B1 isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    50576538..50597422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038625826.1 → XP_038481754.1  cytochrome P450 26B1 isoform X2

    Conserved Domains (1) summary
    cl41757
    Location:37 → 461
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_038625825.1 → XP_038481753.1  cytochrome P450 26B1 isoform X1

    Conserved Domains (1) summary
    cd20637
    Location:60 → 490
    CYP26B1; cytochrome P450 family 26, subfamily B, polypeptide 1

  3. XM_038625824.1 → XP_038481752.1  cytochrome P450 26B1 isoform X4

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    51150622..51171524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038561778.1 → XP_038417706.1  cytochrome P450 26B1 isoform X2

    Conserved Domains (1) summary
    cl41757
    Location:37 → 461
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_038561777.1 → XP_038417705.1  cytochrome P450 26B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PD95, A0A8C0QZX5, A0A8C0R073, A0A8C0T1I2, A0A8I3P615, A0A8I3PB12
    Conserved Domains (1) summary
    cd20637
    Location:60 → 490
    CYP26B1; cytochrome P450 family 26, subfamily B, polypeptide 1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50280509..50301422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038453218.1 → XP_038309146.1  cytochrome P450 26B1 isoform X2

    Conserved Domains (1) summary
    cl41757
    Location:37 → 461
    cytochrome_P450; cytochrome P450 (CYP) superfamily

  2. XM_540236.7 → XP_540236.2  cytochrome P450 26B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PD95, A0A8C0QZX5, A0A8C0R073, A0A8C0T1I2, A0A8I3P615, A0A8I3PB12
    Conserved Domains (1) summary
    cd20637
    Location:60 → 490
    CYP26B1; cytochrome P450 family 26, subfamily B, polypeptide 1
Nucleotide Protein
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