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HTR1E 5-hydroxytryptamine receptor 1E [ Canis lupus familiaris (dog) ]

Gene ID: 481907, updated on 5-Mar-2024

Summary

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Official Symbol
HTR1Eprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Eprovided by VGNC
Primary source
VGNC:VGNC:41825
See related
Ensembl:ENSCAFG00845013734
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (47233636..47327902)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (46270675..46363075)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (46673991..46768334)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (46557642..46650100)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (46487299..46579785)

Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119874212 Neighboring gene metallothionein-2-like Neighboring gene uncharacterized LOC111098347 Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene small cell adhesion glycoprotein-like Neighboring gene developmental pluripotency-associated 5 protein-like Neighboring gene glycoprotein hormones, alpha polypeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-hydroxytryptamine receptor 1E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051816.1 Reference ROS_Cfam_1.0

    Range
    47233636..47327902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684098.1 → XP_038540026.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038684100.1 → XP_038540028.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_038684102.1 → XP_038540030.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Related
    ENSCAFP00845019253.1, ENSCAFT00845024479.1
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_038684099.1 → XP_038540027.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005435765.1 RNA Sequence

  2. XR_005435764.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049272.1 Alternate UMICH_Zoey_3.1

    Range
    46557642..46650100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038492374.1 → XP_038348302.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038492376.1 → XP_038348304.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_038492377.1 → XP_038348305.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_038492375.1 → XP_038348303.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005334277.1 RNA Sequence

  2. XR_005334278.1 RNA Sequence

  3. XR_005334276.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

    Range
    46487299..46579785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038618534.1 → XP_038474462.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038618536.1 → XP_038474464.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_038618537.1 → XP_038474465.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_038618535.1 → XP_038474463.1  5-hydroxytryptamine receptor 1E

    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005402342.1 RNA Sequence

  2. XR_005402341.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

    Range
    46673991..46768334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038554661.1 → XP_038410589.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038554663.1 → XP_038410591.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_038554664.1 → XP_038410592.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_038554662.1 → XP_038410590.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005367993.1 RNA Sequence

  2. XR_005367992.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    46270675..46363075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022426325.2 → XP_022282033.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_022426326.2 → XP_022282034.1  5-hydroxytryptamine receptor 1E

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_005627599.4 → XP_005627656.1  5-hydroxytryptamine receptor 1E

    See identical proteins and their annotated locations for XP_005627656.1

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_005627601.4 → XP_005627658.1  5-hydroxytryptamine receptor 1E

    See identical proteins and their annotated locations for XP_005627658.1

    UniProtKB/TrEMBL
    A0A8C0QRS3, A0A8C0R1S0, A0A8I3RXP5
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

RNA

  1. XR_005436094.1 RNA Sequence

  2. XR_001317449.2 RNA Sequence

Nucleotide Protein
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