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PTPRR protein tyrosine phosphatase receptor type R [ Canis lupus familiaris (dog) ]

Gene ID: 481163, updated on 5-Mar-2024

Summary

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Official Symbol
PTPRRprovided by VGNC
Official Full Name
protein tyrosine phosphatase receptor type Rprovided by VGNC
Primary source
VGNC:VGNC:45197
See related
Ensembl:ENSCAFG00845021934
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (12517368..12751240, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (12324091..12557686, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (12754267..12988172, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (12382959..12616783, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (12630054..12863956, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097597 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 4 Neighboring gene protein tyrosine phosphatase receptor type B Neighboring gene U6 spliceosomal RNA Neighboring gene tetraspanin 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase R
XP_005625687.1
XP_022279924.1
XP_038344050.1
XP_038344051.1
XP_038344052.1
XP_038405940.1
XP_038405941.1
XP_038405942.1
XP_038469935.1
XP_038469936.1
XP_038469938.1
XP_038496461.1
XP_038535280.1
XP_038535281.1
XP_038535282.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    12517368..12751240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038679352.1 → XP_038535280.1  receptor-type tyrosine-protein phosphatase R isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2B0, A0A8C0RDJ2, A0A8I3PDD6
    Related
    ENSCAFP00845030490.1, ENSCAFT00845038935.1
    Conserved Domains (1) summary
    cd14611
    Location:414 → 639
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  2. XM_038679353.1 → XP_038535281.1  receptor-type tyrosine-protein phosphatase R isoform X2

    UniProtKB/TrEMBL
    A0A8C0KTY3, A0A8C0R2B0
    Conserved Domains (1) summary
    cd14611
    Location:293 → 518
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  3. XM_038679354.1 → XP_038535282.1  receptor-type tyrosine-protein phosphatase R isoform X3

    UniProtKB/TrEMBL
    A0A8C0MH33, A0A8I3PEU4
    Related
    ENSCAFP00845030423.1, ENSCAFT00845038845.1
    Conserved Domains (1) summary
    cd14611
    Location:209 → 434
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    12382959..12616783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488122.1 → XP_038344050.1  receptor-type tyrosine-protein phosphatase R isoform X1

    Conserved Domains (1) summary
    cd14611
    Location:414 → 639
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  2. XM_038488123.1 → XP_038344051.1  receptor-type tyrosine-protein phosphatase R isoform X2

    Conserved Domains (1) summary
    cd14611
    Location:293 → 518
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  3. XM_038488124.1 → XP_038344052.1  receptor-type tyrosine-protein phosphatase R isoform X3

    Conserved Domains (1) summary
    cd14611
    Location:209 → 434
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    12630054..12863956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038614007.1 → XP_038469935.1  receptor-type tyrosine-protein phosphatase R isoform X1

    Conserved Domains (1) summary
    cd14611
    Location:414 → 639
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  2. XM_038614008.1 → XP_038469936.1  receptor-type tyrosine-protein phosphatase R isoform X2

    Conserved Domains (1) summary
    cd14611
    Location:293 → 518
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  3. XM_038614010.1 → XP_038469938.1  receptor-type tyrosine-protein phosphatase R isoform X3

    Conserved Domains (1) summary
    cd14611
    Location:209 → 434
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    12754267..12988172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038550013.1 → XP_038405941.1  receptor-type tyrosine-protein phosphatase R isoform X4

    UniProtKB/TrEMBL
    A0A8C0KTY3, A0A8C0R2B0

  2. XM_038550012.1 → XP_038405940.1  receptor-type tyrosine-protein phosphatase R isoform X2

    UniProtKB/TrEMBL
    A0A8C0KTY3, A0A8C0R2B0
    Conserved Domains (1) summary
    cd14611
    Location:293 → 518
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  3. XM_038550014.1 → XP_038405942.1  receptor-type tyrosine-protein phosphatase R isoform X3

    UniProtKB/TrEMBL
    A0A8C0MH33, A0A8I3PEU4
    Conserved Domains (1) summary
    cd14611
    Location:209 → 434
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    12324091..12557686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640533.1 → XP_038496461.1  receptor-type tyrosine-protein phosphatase R isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2B0, A0A8C0RDJ2, A0A8I3PDD6
    Conserved Domains (1) summary
    cd14611
    Location:414 → 639
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  2. XM_005625630.4 → XP_005625687.1  receptor-type tyrosine-protein phosphatase R isoform X2

    UniProtKB/TrEMBL
    A0A8C0KTY3, A0A8C0R2B0
    Conserved Domains (1) summary
    cd14611
    Location:293 → 518
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R

  3. XM_022424216.2 → XP_022279924.1  receptor-type tyrosine-protein phosphatase R isoform X3

    UniProtKB/TrEMBL
    A0A8C0MH33, A0A8I3PEU4
    Conserved Domains (1) summary
    cd14611
    Location:209 → 434
    R-PTPc-R; catalytic domain of receptor-type tyrosine-protein phosphatase R
Nucleotide Protein
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