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WARS1 tryptophanyl-tRNA synthetase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 480435, updated on 5-Mar-2024

Summary

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Official Symbol
WARS1provided by VGNC
Official Full Name
tryptophanyl-tRNA synthetase 1provided by VGNC
Primary source
VGNC:VGNC:48331
See related
Ensembl:ENSCAFG00845004302
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
WARS
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (68893954..68928323, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (68128827..68162983, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (69019419..69053607, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (68555815..68590006, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (68621956..68656146, complement)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097163 Neighboring gene solute carrier family 25 member 47 Neighboring gene WD repeat domain 25 Neighboring gene uncharacterized LOC119872927 Neighboring gene formin-like protein 3 Neighboring gene brain enriched guanylate kinase associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan--tRNA ligase, cytoplasmic
XP_038340137.1
XP_038340138.1
XP_038340139.1
XP_038340140.1
XP_038340141.1
XP_038401652.1
XP_038401653.1
XP_038401654.1
XP_038401655.1
XP_038401656.1
XP_038451588.1
XP_038451594.1
XP_038451600.1
XP_038451608.1
XP_038465744.1
XP_038465745.1
XP_038465746.1
XP_038465747.1
XP_038465748.1
XP_038530567.1
XP_038530568.1
XP_038530569.1
XP_038530570.1
XP_038530571.1
XP_537554.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    68893954..68928323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674639.1 → XP_038530567.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_038674643.1 → XP_038530571.1  tryptophan--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0MLF5, A0A8I3MMH0, A0A8I3MTD7, A0A8P0TQD4
    Related
    ENSCAFP00845006142.1, ENSCAFT00845007758.1
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_038674642.1 → XP_038530570.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  4. XM_038674641.1 → XP_038530569.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Related
    ENSCAFP00845006146.1, ENSCAFT00845007763.1
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  5. XM_038674640.1 → XP_038530568.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

RNA

  1. XR_005431497.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    68555815..68590006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038484209.1 → XP_038340137.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_038484213.1 → XP_038340141.1  tryptophan--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_038484212.1 → XP_038340140.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  4. XM_038484211.1 → XP_038340139.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  5. XM_038484210.1 → XP_038340138.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

RNA

  1. XR_005329969.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    68621956..68656146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609816.1 → XP_038465744.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_038609820.1 → XP_038465748.1  tryptophan--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_038609819.1 → XP_038465747.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  4. XM_038609818.1 → XP_038465746.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  5. XM_038609817.1 → XP_038465745.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

RNA

  1. XR_005398235.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    69019419..69053607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545724.1 → XP_038401652.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_038545728.1 → XP_038401656.1  tryptophan--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0MLF5, A0A8I3MMH0, A0A8I3MTD7, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_038545727.1 → XP_038401655.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  4. XM_038545726.1 → XP_038401654.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  5. XM_038545725.1 → XP_038401653.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

RNA

  1. XR_005363785.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    68128827..68162983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038595660.1 → XP_038451588.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  2. XM_537554.7 → XP_537554.1  tryptophan--tRNA ligase, cytoplasmic isoform X2

    See identical proteins and their annotated locations for XP_537554.1

    UniProtKB/TrEMBL
    A0A8C0MLF5, A0A8I3MMH0, A0A8I3MTD7, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  3. XM_038595680.1 → XP_038451608.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  4. XM_038595672.1 → XP_038451600.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

  5. XM_038595666.1 → XP_038451594.1  tryptophan--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJL8, A0A8C0QYX2, A0A8I3MTD7, A0A8I3RTG1, A0A8P0TQD4
    Conserved Domains (2) summary
    PLN02486
    Location:90 → 471
    PLN02486; aminoacyl-tRNA ligase
    cd00936
    Location:17 → 66
    WEPRS_RNA; WEPRS_RNA binding domain. This short RNA-binding domain is found in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is found in multiple copies in eukaryotic bifunctional glutamyl-prolyl-tRNA synthetases (EPRS) in a region that separates ...

RNA

  1. XR_002629508.2 RNA Sequence

Nucleotide Protein
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