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SNW1 SNW domain containing 1 [ Canis lupus familiaris (dog) ]

Gene ID: 480405, updated on 5-Mar-2024

Summary

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Official Symbol
SNW1provided by VGNC
Official Full Name
SNW domain containing 1provided by VGNC
Primary source
VGNC:VGNC:106611
See related
Ensembl:ENSCAFG00845007783
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (50713229..50746681, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (50166344..50199802, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (50797025..50830653, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (50375212..50408764, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (50398347..50432000, complement)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 1, histone H2A dioxygenase Neighboring gene SRA stem-loop interacting RNA binding protein Neighboring gene uncharacterized LOC119872910 Neighboring gene aarF domain containing kinase 1 Neighboring gene cyclin-dependent kinase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SNW domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    50713229..50746681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674337.1 → XP_038530265.1  SNW domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0ME19, A0A8C0Q9E8, A0A8I3N2S2, A0A8I3NNX8
    Related
    ENSCAFP00845010647.1, ENSCAFT00845013714.1
    Conserved Domains (1) summary
    pfam02731
    Location:178 → 334
    SKIP_SNW; SKIP/SNW domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    50375212..50408764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483930.1 → XP_038339858.1  SNW domain-containing protein 1

    Conserved Domains (1) summary
    pfam02731
    Location:178 → 334
    SKIP_SNW; SKIP/SNW domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    50398347..50432000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609516.1 → XP_038465444.1  SNW domain-containing protein 1

    Conserved Domains (1) summary
    pfam02731
    Location:178 → 334
    SKIP_SNW; SKIP/SNW domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    50797025..50830653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545422.1 → XP_038401350.1  SNW domain-containing protein 1

    UniProtKB/TrEMBL
    A0A8C0ME19, A0A8C0Q9E8, A0A8I3N2S2, A0A8I3NNX8
    Conserved Domains (1) summary
    pfam02731
    Location:178 → 334
    SKIP_SNW; SKIP/SNW domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50166344..50199802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_863207.6 → XP_868300.2  SNW domain-containing protein 1

    See identical proteins and their annotated locations for XP_868300.2

    UniProtKB/TrEMBL
    A0A8C0ME19, A0A8C0Q9E8, A0A8I3N2S2, A0A8I3NNX8
    Conserved Domains (1) summary
    pfam02731
    Location:178 → 334
    SKIP_SNW; SKIP/SNW domain
Nucleotide Protein
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