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ZPR1 ZPR1 zinc finger [ Canis lupus familiaris (dog) ]

Gene ID: 479428, updated on 5-Mar-2024

Summary

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Official Symbol
ZPR1provided by VGNC
Official Full Name
ZPR1 zinc fingerprovided by VGNC
Primary source
VGNC:VGNC:48846
See related
Ensembl:ENSCAFG00845004318
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
ZNF259
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (16725521..16734375)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (16830973..16839827)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (16808093..16816950)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (16862383..16871236)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (16764960..16773814)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein A4 Neighboring gene uncharacterized LOC111095818 Neighboring gene apolipoprotein A5 Neighboring gene uncharacterized LOC111095821 Neighboring gene BUD13 homolog Neighboring gene uncharacterized LOC479430

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZPR1
Names
zinc finger protein 259

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    16725521..16734375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038664803.1 → XP_038520731.1  zinc finger protein ZPR1

    UniProtKB/TrEMBL
    A0A8C0JLK8, A0A8C0MHI6, A0A8I3MXA1
    Related
    ENSCAFP00845006160.1, ENSCAFT00845007778.1
    Conserved Domains (2) summary
    smart00709
    Location:258 → 417
    Zpr1; Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins
    pfam03367
    Location:49 → 206
    zf-ZPR1; ZPR1 zinc-finger domain

RNA

  1. XR_005426828.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    16862383..16871236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038474934.1 → XP_038330862.1  zinc finger protein ZPR1

    Conserved Domains (2) summary
    smart00709
    Location:258 → 417
    Zpr1; Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins
    pfam03367
    Location:49 → 206
    zf-ZPR1; ZPR1 zinc-finger domain

RNA

  1. XR_005325367.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    16764960..16773814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038600253.1 → XP_038456181.1  zinc finger protein ZPR1

    Conserved Domains (2) summary
    smart00709
    Location:258 → 417
    Zpr1; Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins
    pfam03367
    Location:49 → 206
    zf-ZPR1; ZPR1 zinc-finger domain

RNA

  1. XR_005393750.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    16808093..16816950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038536059.1 → XP_038391987.1  zinc finger protein ZPR1

    UniProtKB/TrEMBL
    A0A8C0JLK8, A0A8C0MHI6, A0A8I3MXA1
    Conserved Domains (2) summary
    smart00709
    Location:258 → 417
    Zpr1; Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins
    pfam03367
    Location:49 → 206
    zf-ZPR1; ZPR1 zinc-finger domain

RNA

  1. XR_005359213.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16830973..16839827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_845219.6 → XP_850312.1  zinc finger protein ZPR1

    See identical proteins and their annotated locations for XP_850312.1

    UniProtKB/TrEMBL
    A0A8C0JLK8, A0A8P0SI18
    Conserved Domains (2) summary
    smart00709
    Location:258 → 417
    Zpr1; Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins
    pfam03367
    Location:49 → 206
    zf-ZPR1; ZPR1 zinc-finger domain

RNA

  1. XR_002626432.2 RNA Sequence

Nucleotide Protein
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