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OXCT1 3-oxoacid CoA-transferase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479347, updated on 5-Mar-2024

Summary

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Official Symbol
OXCT1provided by VGNC
Official Full Name
3-oxoacid CoA-transferase 1provided by VGNC
Primary source
VGNC:VGNC:51916
See related
Ensembl:ENSCAFG00845002156
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (68221131..68355789)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (67392579..67524955)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (68633289..68767738)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (67962898..68117238)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (68093650..68227696)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095622 Neighboring gene RAB7A interacting MON1-CCZ1 complex subunit 1 Neighboring gene uncharacterized LOC111095728 Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables succinyl-CoA:3-oxo-acid CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ketone body catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial
XP_038330032.1
XP_038355024.1
XP_038391140.1
XP_038455430.1
XP_038519747.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    68221131..68355789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038663819.1 → XP_038519747.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C0KF00, A0A8C0M6C9, A0A8I3MS52, A0A8P0T476
    Related
    ENSCAFP00845003043.1, ENSCAFT00845003821.1
    Conserved Domains (2) summary
    COG1788
    Location:41 → 274
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    cl00339
    Location:300 → 508
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    67962898..68117238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038474104.1 → XP_038330032.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial isoform X2

    Conserved Domains (2) summary
    COG1788
    Location:41 → 274
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    cl00339
    Location:300 → 508
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    68093650..68227696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038599502.1 → XP_038455430.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial isoform X1

    Conserved Domains (2) summary
    COG1788
    Location:41 → 274
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    cl00339
    Location:300 → 508
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    68633289..68767738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038535212.1 → XP_038391140.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C0KF00, A0A8C0M6C9, A0A8I3MS52, A0A8P0T476
    Conserved Domains (2) summary
    COG1788
    Location:41 → 274
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    cl00339
    Location:300 → 508
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    67392579..67524955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038499096.1 → XP_038355024.1  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C0KF00, A0A8C0M6C9, A0A8I3MS52, A0A8P0T476
    Conserved Domains (2) summary
    COG1788
    Location:41 → 274
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    cl00339
    Location:300 → 508
    SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...
Nucleotide Protein
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