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CCNH cyclin H [ Canis lupus familiaris (dog) ]

Gene ID: 479156, updated on 5-Mar-2024

Summary

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Official Symbol
CCNHprovided by VGNC
Official Full Name
cyclin Hprovided by VGNC
Primary source
VGNC:VGNC:38902
See related
Ensembl:ENSCAFG00845018630
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (20955126..20974862)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (22412153..22431889)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (21180551..21200143)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (20926297..20945993)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (20888786..20908786)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106558571 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene uncharacterized LOC111095149 Neighboring gene RAS p21 protein activator 1 Neighboring gene 60S ribosomal protein L4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIK complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    20955126..20974862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660886.1 → XP_038516814.1  cyclin-H isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q3G4
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

  2. XM_038660887.1 → XP_038516815.1  cyclin-H isoform X2

    UniProtKB/TrEMBL
    A0A8C0JWP6, A0A8C0MQJ3, A0A8C0Q3G4, A0A8I3P7T2
    Related
    ENSCAFP00845025770.1, ENSCAFT00845032934.1
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    20926297..20945993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471468.1 → XP_038327396.1  cyclin-H isoform X1

    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

  2. XM_038471469.1 → XP_038327397.1  cyclin-H isoform X2

    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    20888786..20908786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038596679.1 → XP_038452607.1  cyclin-H isoform X1

    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

  2. XM_038596680.1 → XP_038452608.1  cyclin-H isoform X2

    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    21180551..21200143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038532398.1 → XP_038388326.1  cyclin-H isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q3G4
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

  2. XM_038532399.1 → XP_038388327.1  cyclin-H isoform X2

    UniProtKB/TrEMBL
    A0A8C0JWP6, A0A8C0MQJ3, A0A8C0Q3G4, A0A8I3P7T2
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22412153..22431889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005618142.4 → XP_005618199.1  cyclin-H isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q3G4
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1

  2. XM_536300.7 → XP_536300.3  cyclin-H isoform X2

    UniProtKB/TrEMBL
    A0A8C0JWP6, A0A8C0MQJ3, A0A8C0Q3G4, A0A8I3P7T2
    Conserved Domains (1) summary
    TIGR00569
    Location:2 → 308
    ccl1; cyclin ccl1
Nucleotide Protein
Heading Accession and Version

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