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POLR2H RNA polymerase II, I and III subunit H [ Canis lupus familiaris (dog) ]

Gene ID: 478656, updated on 5-Mar-2024

Summary

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Official Symbol
POLR2Hprovided by VGNC
Official Full Name
RNA polymerase II, I and III subunit Hprovided by VGNC
Primary source
VGNC:VGNC:111644
See related
Ensembl:ENSCAFG00845028415
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 34
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 34 NC_051838.1 (17148082..17152412)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 34 NC_006616.4 (21326156..21330472)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 34 NC_049255.1 (17410010..17414320)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 34 NC_049294.1 (17184969..17189285)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 34 NC_049775.1 (17181038..17185353)

Chromosome 34 - NC_051838.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 1 Neighboring gene small nucleolar RNA SNORD66 Neighboring gene family with sequence similarity 131 member A Neighboring gene chloride voltage-gated channel 2 Neighboring gene thrombopoietin Neighboring gene chordin Neighboring gene uncharacterized LOC111093864

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC3
Names
RNA polymerase II subunit H
polymerase (RNA) II (DNA directed) polypeptide H
XP_038301672.1
XP_038375863.1
XP_038439499.1
XP_038503905.1
XP_535826.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051838.1 Reference ROS_Cfam_1.0

    Range
    17148082..17152412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038445744.1 → XP_038301672.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

    UniProtKB/TrEMBL
    A0A8C0JMB8, A0A8P0T3V0
    Related
    ENSCAFP00845039323.1, ENSCAFT00845050154.1
    Conserved Domains (1) summary
    smart00658
    Location:2 → 147
    RPOL8c; RNA polymerase subunit 8

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049294.1 Alternate UMICH_Zoey_3.1

    Range
    17184969..17189285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038519935.1 → XP_038375863.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

    Conserved Domains (1) summary
    smart00658
    Location:2 → 147
    RPOL8c; RNA polymerase subunit 8

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049775.1 Alternate UNSW_CanFamBas_1.0

    Range
    17181038..17185353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038647977.1 → XP_038503905.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

    Conserved Domains (1) summary
    smart00658
    Location:2 → 147
    RPOL8c; RNA polymerase subunit 8

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049255.1 Alternate UU_Cfam_GSD_1.0

    Range
    17410010..17414320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038583571.1 → XP_038439499.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

    UniProtKB/TrEMBL
    A0A8C0JMB8, A0A8P0T3V0
    Conserved Domains (1) summary
    smart00658
    Location:2 → 147
    RPOL8c; RNA polymerase subunit 8

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006616.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21326156..21330472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_535826.7 → XP_535826.1  DNA-directed RNA polymerases I, II, and III subunit RPABC3

    See identical proteins and their annotated locations for XP_535826.1

    UniProtKB/TrEMBL
    A0A8C0JMB8, A0A8P0T3V0
    Conserved Domains (1) summary
    smart00658
    Location:2 → 147
    RPOL8c; RNA polymerase subunit 8
Nucleotide Protein
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