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GBE1 1,4-alpha-glucan branching enzyme 1 [ Canis lupus familiaris (dog) ]

Gene ID: 478380, updated on 5-Mar-2024

Summary

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Official Symbol
GBE1provided by VGNC
Official Full Name
1,4-alpha-glucan branching enzyme 1provided by VGNC
Primary source
VGNC:VGNC:41132
See related
Ensembl:ENSCAFG00845019273
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 31
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (5750707..6019215)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (5809115..6081275)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (6156072..6424439)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (5717055..5986758)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (5767815..6037553)

Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867004 Neighboring gene uncharacterized LOC111093422 Neighboring gene uncharacterized LOC111093498 Neighboring gene uncharacterized LOC119867034 Neighboring gene intersectin-1-like Neighboring gene ribose-phosphate pyrophosphokinase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-alpha-glucan-branching enzyme
Names
1,4-alpha-glucan-branching enzyme-like
glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV)
glycogen branching enzyme 1
XP_038299112.1
XP_038373535.1
XP_038437120.1
XP_038501493.1
XP_535555.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051835.1 Reference ROS_Cfam_1.0

    Range
    5750707..6019215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038443184.1 → XP_038299112.1  1,4-alpha-glucan-branching enzyme

    UniProtKB/TrEMBL
    A0A8C0LQ65, A0A8C0N0N8, A0A8C0TJQ5, A0A8I3P5A5
    Related
    ENSCAFP00845026835.1, ENSCAFT00845034284.1
    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049291.1 Alternate UMICH_Zoey_3.1

    Range
    5717055..5986758
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038517607.1 → XP_038373535.1  1,4-alpha-glucan-branching enzyme

    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

    Range
    5767815..6037553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038645565.1 → XP_038501493.1  1,4-alpha-glucan-branching enzyme

    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

    Range
    6156072..6424439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581192.1 → XP_038437120.1  1,4-alpha-glucan-branching enzyme

    UniProtKB/TrEMBL
    A0A8C0LQ65, A0A8C0N0N8, A0A8C0TJQ5, A0A8I3P5A5
    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    5809115..6081275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_535555.6 → XP_535555.3  1,4-alpha-glucan-branching enzyme

    UniProtKB/TrEMBL
    A0A8C0LQ65, A0A8C0N0N8, A0A8C0TJQ5, A0A8I3P5A5
    Conserved Domains (1) summary
    PLN02447
    Location:27 → 696
    PLN02447; 1,4-alpha-glucan-branching enzyme
Nucleotide Protein
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