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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051832.1 Reference ROS_Cfam_1.0
- Range
-
13433260..13470158 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038440266.1 → XP_038296194.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T7N3
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:701 → 735
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 651
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038440265.1 → XP_038296193.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1
- UniProtKB/TrEMBL
- A0A8C0T7N3, A0A8C0Z216, A0A8I3P499
- Related
- ENSCAFP00845022741.1, ENSCAFT00845028900.1
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:709 → 743
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038440268.1 → XP_038296196.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X4
- UniProtKB/TrEMBL
-
A0A8C0QXH1
- Conserved Domains (4) summary
-
- cd17046
Location:247 → 323
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:645 → 679
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:322 → 595
- IKBKB_SDD; IQBAL scaffold dimerization domain
- cl21453
Location:1 → 245
- PKc_like; Protein Kinases, catalytic domain
-
XM_038440267.1 → XP_038296195.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X3
- UniProtKB/TrEMBL
-
A0A8C0QXJ4
- Conserved Domains (3) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
RNA
-
XR_005303625.1 RNA Sequence
-
XR_005303624.1 RNA Sequence
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049288.1 Alternate UMICH_Zoey_3.1
- Range
-
12980085..13016958 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038514882.1 → XP_038370810.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:701 → 735
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 651
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038514881.1 → XP_038370809.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:709 → 743
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038514884.1 → XP_038370812.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X4
- Conserved Domains (4) summary
-
- cd17046
Location:247 → 323
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:645 → 679
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:322 → 595
- IKBKB_SDD; IQBAL scaffold dimerization domain
- cl21453
Location:1 → 245
- PKc_like; Protein Kinases, catalytic domain
-
XM_038514883.1 → XP_038370811.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X3
- Conserved Domains (3) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
RNA
-
XR_005346730.1 RNA Sequence
-
XR_005346729.1 RNA Sequence
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049769.1 Alternate UNSW_CanFamBas_1.0
- Range
-
13017918..13055038 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038642679.1 → XP_038498607.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:701 → 735
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 651
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038642678.1 → XP_038498606.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:709 → 743
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038642681.1 → XP_038498609.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X4
- Conserved Domains (4) summary
-
- cd17046
Location:247 → 323
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:645 → 679
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:322 → 595
- IKBKB_SDD; IQBAL scaffold dimerization domain
- cl21453
Location:1 → 245
- PKc_like; Protein Kinases, catalytic domain
-
XM_038642680.1 → XP_038498608.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X3
- Conserved Domains (3) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
RNA
-
XR_005414265.1 RNA Sequence
-
XR_005414264.1 RNA Sequence
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049249.1 Alternate UU_Cfam_GSD_1.0
- Range
-
13152231..13189348 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038578513.1 → XP_038434441.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T7N3
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:701 → 735
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 651
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038578512.1 → XP_038434440.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1
- UniProtKB/TrEMBL
- A0A8C0T7N3, A0A8C0Z216, A0A8I3P499
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:709 → 743
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038578514.1 → XP_038434442.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X3
- UniProtKB/TrEMBL
-
A0A8C0QXJ4
- Conserved Domains (3) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
RNA
-
XR_005380498.1 RNA Sequence
-
XR_005380497.1 RNA Sequence
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
13147837..13184707 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038460322.1 → XP_038316250.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T7N3
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:701 → 735
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 651
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_534990.7 → XP_534990.2 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1
- UniProtKB/TrEMBL
- A0A8C0T7N3, A0A8C0Z216, A0A8I3P499
- Conserved Domains (4) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:709 → 743
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
-
XM_038460323.1 → XP_038316251.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X4
- UniProtKB/TrEMBL
-
A0A8C0QXH1
- Conserved Domains (4) summary
-
- cd17046
Location:247 → 323
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam12179
Location:645 → 679
- IKKbetaNEMObind; I-kappa-kinase-beta NEMO binding domain
- pfam18397
Location:322 → 595
- IKBKB_SDD; IQBAL scaffold dimerization domain
- cl21453
Location:1 → 245
- PKc_like; Protein Kinases, catalytic domain
-
XM_005637611.3 → XP_005637668.1 inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X3
- UniProtKB/TrEMBL
-
A0A8C0QXJ4
- Conserved Domains (3) summary
-
- cd14039
Location:21 → 309
- STKc_IKK_alpha; Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha
- cd17046
Location:311 → 387
- Ubl_IKKA_like; ubiquitin-like (Ubl) domain found in inhibitor of nuclear factor kappa-B kinases, IKK-alpha and IKK-beta, and similar proteins
- pfam18397
Location:386 → 659
- IKBKB_SDD; IQBAL scaffold dimerization domain
RNA
-
XR_001314788.3 RNA Sequence
-
XR_001314787.3 RNA Sequence