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ABCD2 ATP binding cassette subfamily D member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 477643, updated on 11-Apr-2024

Summary

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Official Symbol
ABCD2provided by VGNC
Official Full Name
ATP binding cassette subfamily D member 2provided by VGNC
Primary source
VGNC:VGNC:37446
See related
Ensembl:ENSCAFG00845030727
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (14182734..14251081)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (32351661..32426133, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (32500349..32568488, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (13992155..14060013)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (14030140..14098038)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 13 Neighboring gene U6 spliceosomal RNA Neighboring gene regulator of DNA class I crossover intermediates 1 Neighboring gene ferritin light chain-like Neighboring gene uncharacterized LOC106557901 Neighboring gene kinesin family member 21A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    14182734..14251081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438544.1 → XP_038294472.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A8C0L106, A0A8C0PKJ3, A0A8C0TS19, A0A8I3Q568, A0A8P0PCV7
    Related
    ENSCAFP00845042890.1, ENSCAFT00845054558.1
    Conserved Domains (1) summary
    TIGR00954
    Location:74 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    13992155..14060013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038513224.1 → XP_038369152.1  ATP-binding cassette sub-family D member 2

    Conserved Domains (1) summary
    TIGR00954
    Location:74 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    14030140..14098038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641007.1 → XP_038496935.1  ATP-binding cassette sub-family D member 2

    Conserved Domains (1) summary
    TIGR00954
    Location:74 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    32500349..32568488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577276.1 → XP_038433204.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A8C0L106, A0A8C0PKJ3, A0A8C0TS19, A0A8I3Q568, A0A8P0PCV7
    Conserved Domains (1) summary
    TIGR00954
    Location:74 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32351661..32426133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005636977.4 → XP_005637034.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A8C0L106, A0A8C0PKJ3, A0A8C0TS19, A0A8I3Q568, A0A8P0PCV7
    Conserved Domains (1) summary
    TIGR00954
    Location:74 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
Nucleotide Protein
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