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KRT18 keratin 18 [ Canis lupus familiaris (dog) ]

Gene ID: 477601, updated on 5-Mar-2024

Summary

Official Symbol
KRT18provided by VGNC
Official Full Name
keratin 18provided by VGNC
Primary source
VGNC:VGNC:106506
See related
Ensembl:ENSCAFG00845023645
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
CK18
Orthologs
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Genomic context

Location:
chromosome: 27
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2190002..2194108, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (44058883..44062982)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44457950..44461835)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2207095..2210994, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2193381..2197266, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102156972 Neighboring gene eukaryotic translation initiation factor 4B Neighboring gene uncharacterized LOC102156665 Neighboring gene uncharacterized LOC111092796 Neighboring gene keratin 8

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
keratin, type I cytoskeletal 18
Names
cytokeratin 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001346040.1NP_001332969.1  keratin, type I cytoskeletal 18

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000362
    UniProtKB/TrEMBL
    A0A8C0L7B9, A0A8C0LAN6, A0A8C0PK81, A0A8I3PJ84
    Related
    ENSCAFP00845032792.1, ENSCAFT00845041807.1
    Conserved Domains (1) summary
    pfam00038
    Location:81391
    Filament; Intermediate filament protein

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2190002..2194108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2207095..2210994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2193381..2197266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    44457950..44461835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44058883..44062982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)