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RNF6 ring finger protein 6 [ Canis lupus familiaris (dog) ]

Gene ID: 477332, updated on 5-Mar-2024

Summary

Official Symbol
RNF6provided by VGNC
Official Full Name
ring finger protein 6provided by VGNC
Primary source
VGNC:VGNC:45674
See related
Ensembl:ENSCAFG00845026572
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

Location:
chromosome: 25
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (13334535..13363674)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (13269392..13298524)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (13261674..13290793)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (13218261..13247377)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (13210921..13240050)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865913 Neighboring gene cyclin dependent kinase 8 Neighboring gene uncharacterized LOC111092280 Neighboring gene ATPase, aminophospholipid transporter, class I, type 8A, member 2-like Neighboring gene trifunctional enzyme subunit alpha, mitochondrial-like Neighboring gene G2/mitotic-specific cyclin-B2-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
E3 ubiquitin-protein ligase RNF6
XP_003433344.1
XP_005635590.1
XP_005635591.1
XP_005635592.1
XP_022265335.1
XP_022265336.1
XP_022265337.1
XP_022265338.1
XP_038290948.1
XP_038290949.1
XP_038290950.1
XP_038290951.1
XP_038290952.1
XP_038290953.1
XP_038290955.1
XP_038290956.1
XP_038290957.1
XP_038290958.1
XP_038314138.1
XP_038365933.1
XP_038365934.1
XP_038365935.1
XP_038365936.1
XP_038365937.1
XP_038365939.1
XP_038365940.1
XP_038365941.1
XP_038365942.1
XP_038365943.1
XP_038429362.1
XP_038429363.1
XP_038429364.1
XP_038429365.1
XP_038429366.1
XP_038429367.1
XP_038429368.1
XP_038429369.1
XP_038429370.1
XP_038429371.1
XP_038493657.1
XP_038493659.1
XP_038493660.1
XP_038493661.1
XP_038493662.1
XP_038493663.1
XP_038493664.1
XP_038493665.1
XP_038493666.1
XP_038493667.1
XP_534526.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    13334535..13363674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038435021.1XP_038290949.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Related
    ENSCAFP00845036723.1, ENSCAFT00845046823.1
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  2. XM_038435024.1XP_038290952.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  3. XM_038435029.1XP_038290957.1  E3 ubiquitin-protein ligase RNF6 isoform X2

  4. XM_038435030.1XP_038290958.1  E3 ubiquitin-protein ligase RNF6 isoform X3

  5. XM_038435020.1XP_038290948.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  6. XM_038435025.1XP_038290953.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  7. XM_038435023.1XP_038290951.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  8. XM_038435028.1XP_038290956.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  9. XM_038435027.1XP_038290955.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  10. XM_038435022.1XP_038290950.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Related
    ENSCAFP00845036815.1, ENSCAFT00845046932.1
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins

RNA

  1. XR_005301608.1 RNA Sequence

  2. XR_005301605.1 RNA Sequence

  3. XR_005301607.1 RNA Sequence

  4. XR_005301609.1 RNA Sequence

  5. XR_005301603.1 RNA Sequence

  6. XR_005301604.1 RNA Sequence

  7. XR_005301606.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    13218261..13247377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038510006.1XP_038365934.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  2. XM_038510009.1XP_038365937.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  3. XM_038510014.1XP_038365942.1  E3 ubiquitin-protein ligase RNF6 isoform X2

  4. XM_038510015.1XP_038365943.1  E3 ubiquitin-protein ligase RNF6 isoform X3

  5. XM_038510005.1XP_038365933.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  6. XM_038510011.1XP_038365939.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  7. XM_038510008.1XP_038365936.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  8. XM_038510013.1XP_038365941.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  9. XM_038510007.1XP_038365935.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  10. XM_038510012.1XP_038365940.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins

RNA

  1. XR_005344610.1 RNA Sequence

  2. XR_005344607.1 RNA Sequence

  3. XR_005344609.1 RNA Sequence

  4. XR_005344611.1 RNA Sequence

  5. XR_005344605.1 RNA Sequence

  6. XR_005344606.1 RNA Sequence

  7. XR_005344608.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    13210921..13240050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637731.1XP_038493659.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  2. XM_038637734.1XP_038493662.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  3. XM_038637738.1XP_038493666.1  E3 ubiquitin-protein ligase RNF6 isoform X2

  4. XM_038637739.1XP_038493667.1  E3 ubiquitin-protein ligase RNF6 isoform X3

  5. XM_038637729.1XP_038493657.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  6. XM_038637735.1XP_038493663.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  7. XM_038637733.1XP_038493661.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  8. XM_038637737.1XP_038493665.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  9. XM_038637732.1XP_038493660.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  10. XM_038637736.1XP_038493664.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins

RNA

  1. XR_005412334.1 RNA Sequence

  2. XR_005412331.1 RNA Sequence

  3. XR_005412333.1 RNA Sequence

  4. XR_005412335.1 RNA Sequence

  5. XR_005412329.1 RNA Sequence

  6. XR_005412330.1 RNA Sequence

  7. XR_005412332.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    13261674..13290793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573435.1XP_038429363.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  2. XM_038573438.1XP_038429366.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  3. XM_038573442.1XP_038429370.1  E3 ubiquitin-protein ligase RNF6 isoform X2

  4. XM_038573443.1XP_038429371.1  E3 ubiquitin-protein ligase RNF6 isoform X3

  5. XM_038573434.1XP_038429362.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  6. XM_038573439.1XP_038429367.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  7. XM_038573437.1XP_038429365.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  8. XM_038573441.1XP_038429369.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  9. XM_038573440.1XP_038429368.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  10. XM_038573436.1XP_038429364.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins

RNA

  1. XR_005378450.1 RNA Sequence

  2. XR_005378447.1 RNA Sequence

  3. XR_005378449.1 RNA Sequence

  4. XR_005378451.1 RNA Sequence

  5. XR_005378445.1 RNA Sequence

  6. XR_005378446.1 RNA Sequence

  7. XR_005378448.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    13269392..13298524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534526.7XP_534526.2  E3 ubiquitin-protein ligase RNF6 isoform X1

    See identical proteins and their annotated locations for XP_534526.2

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  2. XM_005635535.4XP_005635592.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    See identical proteins and their annotated locations for XP_005635592.1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  3. XM_038458210.1XP_038314138.1  E3 ubiquitin-protein ligase RNF6 isoform X2

  4. XM_022409630.2XP_022265338.1  E3 ubiquitin-protein ligase RNF6 isoform X3

  5. XM_003433296.5XP_003433344.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    See identical proteins and their annotated locations for XP_003433344.1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  6. XM_022409627.2XP_022265335.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  7. XM_005635533.4XP_005635590.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    See identical proteins and their annotated locations for XP_005635590.1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  8. XM_022409629.2XP_022265337.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  9. XM_022409628.2XP_022265336.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins
  10. XM_005635534.4XP_005635591.1  E3 ubiquitin-protein ligase RNF6 isoform X1

    See identical proteins and their annotated locations for XP_005635591.1

    UniProtKB/TrEMBL
    A0A8C0NU79, A0A8C0Z2U1, A0A8I3PYQ0, A0A8I3S5X8, A0A8P0PME0
    Conserved Domains (1) summary
    cd16673
    Location:628672
    RING-H2_RNF6; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase RNF6 and similar proteins

RNA

  1. XR_002618974.2 RNA Sequence

  2. XR_002618970.2 RNA Sequence

  3. XR_002618972.2 RNA Sequence

  4. XR_005314421.1 RNA Sequence

  5. XR_002618966.2 RNA Sequence

  6. XR_002618968.2 RNA Sequence

  7. XR_002618973.2 RNA Sequence