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GCDH glutaryl-CoA dehydrogenase [ Canis lupus familiaris (dog) ]

Gene ID: 476696, updated on 5-Mar-2024

Summary

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Official Symbol
GCDHprovided by VGNC
Official Full Name
glutaryl-CoA dehydrogenaseprovided by VGNC
Primary source
VGNC:VGNC:41141
See related
Ensembl:ENSCAFG00845015478
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (49801277..49807408, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (49156598..49162728, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (49681416..49687548, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (49012394..49018522, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (49438870..49444995, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene calreticulin Neighboring gene phenylalanyl-tRNA synthetase subunit alpha Neighboring gene synaptonemal complex central element protein 2 Neighboring gene KLF transcription factor 1 Neighboring gene deoxyribonuclease 2, lysosomal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutaryl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutaryl-CoA dehydrogenase, mitochondrial
Names
glutaryl-Coenzyme A dehydrogenase
XP_038284380.1
XP_038360024.1
XP_038423053.1
XP_038487196.1
XP_533901.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    49801277..49807408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428452.1 → XP_038284380.1  glutaryl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0JYR2, A0A8C0RNJ3, A0A8C0TPW3
    Related
    ENSCAFP00845021708.1, ENSCAFT00845027589.1
    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    49012394..49018522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504096.1 → XP_038360024.1  glutaryl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    49438870..49444995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631268.1 → XP_038487196.1  glutaryl-CoA dehydrogenase, mitochondrial

    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    49681416..49687548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567125.1 → XP_038423053.1  glutaryl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0JYR2, A0A8C0RNJ3, A0A8C0TPW3
    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    49156598..49162728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_533901.7 → XP_533901.2  glutaryl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0JYR2, A0A8C0RNJ3, A0A8C0TPW3
    Conserved Domains (1) summary
    cd01151
    Location:48 → 434
    GCD; Glutaryl-CoA dehydrogenase
Nucleotide Protein
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