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RFXANK regulatory factor X associated ankyrin containing protein [ Canis lupus familiaris (dog) ]

Gene ID: 476662, updated on 5-Mar-2024

Summary

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Official Symbol
RFXANKprovided by VGNC
Official Full Name
regulatory factor X associated ankyrin containing proteinprovided by VGNC
Primary source
VGNC:VGNC:45511
See related
Ensembl:ENSCAFG00845014775
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (44465983..44472200, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (43894968..43901185, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (44388184..44394400, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (43703088..43709303, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (44112868..44119084, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene hyaluronan and proteoglycan link protein 4 Neighboring gene neurocan Neighboring gene nuclear receptor 2C2 associated protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene myocyte enhancer factor 2B Neighboring gene transmembrane protein 161A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein RFXANK

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    44465983..44472200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428066.1 → XP_038283994.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_038428065.1 → XP_038283993.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_038428067.1 → XP_038283995.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Related
    ENSCAFP00845020839.1, ENSCAFT00845026444.1
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_038428068.1 → XP_038283996.1  DNA-binding protein RFXANK isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    43703088..43709303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038503725.1 → XP_038359653.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_038503724.1 → XP_038359652.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_038503726.1 → XP_038359654.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_038503727.1 → XP_038359655.1  DNA-binding protein RFXANK isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    44112868..44119084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038630891.1 → XP_038486819.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_038630890.1 → XP_038486818.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_038630892.1 → XP_038486820.1  DNA-binding protein RFXANK isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_038630893.1 → XP_038486821.1  DNA-binding protein RFXANK isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    44388184..44394400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038566749.1 → XP_038422677.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_038566748.1 → XP_038422676.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_038566750.1 → XP_038422678.1  DNA-binding protein RFXANK isoform X1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_038566751.1 → XP_038422679.1  DNA-binding protein RFXANK isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43894968..43901185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005632663.3 → XP_005632720.1  DNA-binding protein RFXANK isoform X1

    See identical proteins and their annotated locations for XP_005632720.1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_005632662.3 → XP_005632719.1  DNA-binding protein RFXANK isoform X1

    See identical proteins and their annotated locations for XP_005632719.1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_005632664.3 → XP_005632721.1  DNA-binding protein RFXANK isoform X1

    See identical proteins and their annotated locations for XP_005632721.1

    UniProtKB/TrEMBL
    A0A8C0KEG4, A0A8C0TEA1, A0A8I3NYC0
    Conserved Domains (3) summary
    PTZ00322
    Location:60 → 251
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:128 → 218
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_022406829.2 → XP_022262537.1  DNA-binding protein RFXANK isoform X2

    Conserved Domains (3) summary
    sd00045
    Location:123 → 154
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:94 → 144
    Ank_4; Ankyrin repeats (many copies)
    pfam12796
    Location:128 → 210
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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