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NCOA1 nuclear receptor coactivator 1 [ Canis lupus familiaris (dog) ]

Gene ID: 475684, updated on 5-Mar-2024

Summary

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Official Symbol
NCOA1provided by VGNC
Official Full Name
nuclear receptor coactivator 1provided by VGNC
Primary source
VGNC:VGNC:43659
See related
Ensembl:ENSCAFG00845024663
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
SRC1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
19
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (19302445..19397682)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (18777980..19021230)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (18940197..19183703)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (18890805..19134195)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (18899937..19143634)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090532 Neighboring gene uncharacterized LOC119881790 Neighboring gene peptidyl-tRNA hydrolase domain containing 1 Neighboring gene centromere protein O Neighboring gene adenylate cyclase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification and analysis of basic helix-loop-helix domains in dog, Canis lupus familiaris. Wang XH, et al. Mol Genet Genomics, 2015 Apr. PMID 25403511

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: nuclear receptor coactivator 1; nuclear receptor coactivator 1
Names
steroid receptor coactivator 1
XP_005630255.1
XP_005630258.1
XP_005630259.1
XP_005630260.1
XP_038309181.1
XP_038354304.1
XP_038354305.1
XP_038354306.1
XP_038354307.1
XP_038354308.1
XP_038416859.1
XP_038416860.1
XP_038416861.1
XP_038416862.1
XP_038416863.1
XP_038480895.1
XP_038480896.1
XP_038480897.1
XP_038480899.1
XP_038480900.1
XP_038480901.1
XP_038546804.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    19302445..19397682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690876.1 → XP_038546804.1  LOW QUALITY PROTEIN: nuclear receptor coactivator 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LPA9, A0A8I3PRC4, A0A8P0N6V4
    Related
    ENSCAFP00845034161.1, ENSCAFT00845043605.1
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    18890805..19134195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038498379.1 → XP_038354307.1  nuclear receptor coactivator 1 isoform X3

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  2. XM_038498377.1 → XP_038354305.1  nuclear receptor coactivator 1 isoform X1

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  3. XM_038498378.1 → XP_038354306.1  nuclear receptor coactivator 1 isoform X2

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  4. XM_038498380.1 → XP_038354308.1  nuclear receptor coactivator 1 isoform X3

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  5. XM_038498376.1 → XP_038354304.1  nuclear receptor coactivator 1 isoform X1

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    18899937..19143634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038624967.1 → XP_038480895.1  nuclear receptor coactivator 1 isoform X1

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  2. XM_038624968.1 → XP_038480896.1  nuclear receptor coactivator 1 isoform X1

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  3. XM_038624972.1 → XP_038480900.1  nuclear receptor coactivator 1 isoform X5

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  4. XM_038624969.1 → XP_038480897.1  nuclear receptor coactivator 1 isoform X1

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  5. XM_038624971.1 → XP_038480899.1  nuclear receptor coactivator 1 isoform X4

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  6. XM_038624973.1 → XP_038480901.1  nuclear receptor coactivator 1 isoform X5

    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    18940197..19183703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038560934.1 → XP_038416862.1  nuclear receptor coactivator 1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0LLJ8, A0A8C0NNK5, A0A8I3PNV8
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  2. XM_038560932.1 → XP_038416860.1  nuclear receptor coactivator 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LPA9, A0A8I3PRC4, A0A8P0N6V4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  3. XM_038560933.1 → XP_038416861.1  nuclear receptor coactivator 1 isoform X6

    UniProtKB/TrEMBL
    A0A8I3PRC4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  4. XM_038560935.1 → XP_038416863.1  nuclear receptor coactivator 1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0LLJ8, A0A8C0NNK5, A0A8I3PNV8
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  5. XM_038560931.1 → XP_038416859.1  nuclear receptor coactivator 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LPA9, A0A8I3PRC4, A0A8P0N6V4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    18777980..19021230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038453253.1 → XP_038309181.1  nuclear receptor coactivator 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LPA9, A0A8I3PRC4, A0A8P0N6V4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  2. XM_005630201.4 → XP_005630258.1  nuclear receptor coactivator 1 isoform X8

    UniProtKB/TrEMBL
    A0A8I3PRC4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  3. XM_005630198.4 → XP_005630255.1  nuclear receptor coactivator 1 isoform X1

    See identical proteins and their annotated locations for XP_005630255.1

    UniProtKB/TrEMBL
    A0A8C0LPA9, A0A8I3PRC4, A0A8P0N6V4
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  4. XM_005630203.4 → XP_005630260.1  nuclear receptor coactivator 1 isoform X9

    See identical proteins and their annotated locations for XP_005630260.1

    UniProtKB/TrEMBL
    A0A8C0LLJ8, A0A8C0NNK5, A0A8I3PNV8
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein

  5. XM_005630202.4 → XP_005630259.1  nuclear receptor coactivator 1 isoform X9

    See identical proteins and their annotated locations for XP_005630259.1

    UniProtKB/TrEMBL
    A0A8C0LLJ8, A0A8C0NNK5, A0A8I3PNV8
    Conserved Domains (9) summary
    cd00130
    Location:120 → 213
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam09606
    Location:974 → 1345
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd18948
    Location:27 → 87
    bHLH-PAS_NCoA1_SRC1; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in nuclear receptor coactivator 1 (NCoA-1) and similar proteins
    pfam07469
    Location:1212 → 1268
    DUF1518; Domain of unknown function (DUF1518)
    pfam08815
    Location:924 → 969
    Nuc_rec_co-act; Nuclear receptor coactivator
    pfam08832
    Location:632 → 708
    SRC-1; Steroid receptor coactivator
    pfam14598
    Location:260 → 370
    PAS_11; PAS domain
    pfam16279
    Location:741 → 818
    DUF4927; Domain of unknown function (DUF4927)
    pfam16665
    Location:468 → 590
    NCOA_u2; Unstructured region on nuclear receptor coactivator protein
Nucleotide Protein
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