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SKP1 S-phase kinase associated protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 474682, updated on 5-Mar-2024

Summary

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Official Symbol
SKP1provided by VGNC
Official Full Name
S-phase kinase associated protein 1provided by VGNC
Primary source
VGNC:VGNC:59042
See related
Ensembl:ENSCAFG00845012532
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (23152831..23168252, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (21098642..21112489, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (22361395..22375242, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (21853772..21867627, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (21718806..21732658, complement)

Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097930 Neighboring gene transcription factor 7 Neighboring gene protein phosphatase 2 catalytic subunit alpha Neighboring gene cyclin dependent kinase like 3 Neighboring gene ubiquitin conjugating enzyme E2 B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S-phase kinase-associated protein 1
NP_001239337.1
XP_038536872.1
XP_038536873.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001252408.1 → NP_001239337.1  S-phase kinase-associated protein 1

    See identical proteins and their annotated locations for NP_001239337.1

    Status: VALIDATED

    Source sequence(s)
    GR891800
    UniProtKB/TrEMBL
    A0A8C0JIG0, A0A8C0QKG1, A0A8I3NPT2
    Conserved Domains (2) summary
    cd18322
    Location:4 → 127
    BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
    pfam01466
    Location:113 → 160
    Skp1; Skp1 family, dimerization domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051815.1 Reference ROS_Cfam_1.0

    Range
    23152831..23168252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038680944.1 → XP_038536872.1  S-phase kinase-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JIG0, A0A8C0QKG1, A0A8I3NPT2
    Related
    ENSCAFP00845017571.1, ENSCAFT00845022350.1
    Conserved Domains (2) summary
    cd18322
    Location:4 → 127
    BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
    pfam01466
    Location:113 → 160
    Skp1; Skp1 family, dimerization domain

  2. XM_038680945.1 → XP_038536873.1  S-phase kinase-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JIG0, A0A8C0QKG1, A0A8I3NPT2
    Conserved Domains (2) summary
    cd18322
    Location:4 → 127
    BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
    pfam01466
    Location:113 → 160
    Skp1; Skp1 family, dimerization domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049271.1 Alternate UMICH_Zoey_3.1

    Range
    21853772..21867627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

    Range
    21718806..21732658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

    Range
    22361395..22375242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    21098642..21112489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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