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POLR3B RNA polymerase III subunit B [ Canis lupus familiaris (dog) ]

Gene ID: 474531, updated on 5-Mar-2024

Summary

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Official Symbol
POLR3Bprovided by VGNC
Official Full Name
RNA polymerase III subunit Bprovided by VGNC
Primary source
VGNC:VGNC:44801
See related
Ensembl:ENSCAFG00845013006
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
30
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (33043060..33150697, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (32122143..32229740, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (33255591..33362991, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (32779093..32886667, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (33067892..33175469, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119873646 Neighboring gene regulatory factor X4 Neighboring gene uncharacterized LOC119873763 Neighboring gene uncharacterized LOC119873647 Neighboring gene t-complex 11 like 2 Neighboring gene ribosomal protein L37 pseudogene Neighboring gene uncharacterized LOC111097677 Neighboring gene uncharacterized LOC111097678

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC2
Names
polymerase (RNA) III (DNA directed) polypeptide B
XP_005626007.1
XP_005626008.1
XP_022280225.1
XP_038344757.1
XP_038344758.1
XP_038344759.1
XP_038344760.1
XP_038406719.1
XP_038406720.1
XP_038406721.1
XP_038406723.1
XP_038470640.1
XP_038470641.1
XP_038470642.1
XP_038470643.1
XP_038536009.1
XP_038536010.1
XP_038536011.1
XP_038536012.1
XP_531760.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    33043060..33150697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038680082.1 → XP_038536010.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RCC3, A0A8I3RZT8, A0A8P0PF51
    Related
    ENSCAFP00845018212.1, ENSCAFT00845023220.1
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1073
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:485 → 546
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:567 → 607
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_038680081.1 → XP_038536009.1  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M5D9, A0A8I3RXA7, A0A8P0PF51
    Related
    ENSCAFP00845018153.1, ENSCAFT00845023153.1
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_038680083.1 → XP_038536011.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JVA0
    Conserved Domains (3) summary
    cd00653
    Location:1 → 1069
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:481 → 542
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:563 → 603
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_038680084.1 → XP_038536012.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 904
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    32779093..32886667 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488830.1 → XP_038344758.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1073
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:485 → 546
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:567 → 607
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_038488829.1 → XP_038344757.1  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_038488831.1 → XP_038344759.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    Conserved Domains (3) summary
    cd00653
    Location:1 → 1069
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:481 → 542
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:563 → 603
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_038488832.1 → XP_038344760.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 904
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    33067892..33175469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038614713.1 → XP_038470641.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1073
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:485 → 546
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:567 → 607
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_038614712.1 → XP_038470640.1  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_038614714.1 → XP_038470642.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    Conserved Domains (3) summary
    cd00653
    Location:1 → 1069
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:481 → 542
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:563 → 603
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_038614715.1 → XP_038470643.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 904
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    33255591..33362991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038550792.1 → XP_038406720.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RCC3, A0A8I3RZT8, A0A8P0PF51
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1073
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:485 → 546
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:567 → 607
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_038550791.1 → XP_038406719.1  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M5D9, A0A8I3RXA7, A0A8P0PF51
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_038550793.1 → XP_038406721.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JVA0
    Conserved Domains (3) summary
    cd00653
    Location:1 → 1069
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:481 → 542
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:563 → 603
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_038550795.1 → XP_038406723.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 904
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32122143..32229740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005625950.4 → XP_005626007.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RCC3, A0A8I3RZT8, A0A8P0PF51
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1073
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:485 → 546
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:567 → 607
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_531760.7 → XP_531760.2  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M5D9, A0A8I3RXA7, A0A8P0PF51
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_005625951.4 → XP_005626008.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0JVA0
    Conserved Domains (3) summary
    cd00653
    Location:1 → 1069
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:481 → 542
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:563 → 603
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_022424517.2 → XP_022280225.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 904
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5
Nucleotide Protein
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